yatisht / usher

Ultrafast Sample Placement on Existing Trees
MIT License
121 stars 40 forks source link

Add column of number of samples of query in subtree #300

Open corneliusroemer opened 1 year ago

corneliusroemer commented 1 year ago

Related to #299

When I usher a 100 sequences, I'm only really interested in the biggest subtrees, or subtrees that have more than a handful of sequences.

However right now it's not easy to know how many samples of the submission fasta are in each subtree.

It would be nice if there as an extra column: "number of submitted sequences in subtree" that would list the number of other submitted sequences in the subtree where that sequence is.

image

You could easily make space for this column by reducing the width of the three wide columns on the right - these don't need to be wide to contain numbers in the range 0-9

image