Is there any way to Identify amino acid mutations spread in large population with .pb fileand the -matutils -summary command? I can only get a tsv file with nucleotide mutation with their number of occurrences. So, I was wondering if we could get the same for amino acid mutation/mutation in covid-19 genes (ORF1ab, S,E etc etc )
Context: I am studying the Covid-19 mutation in a specific country with around 3500 samples to identify which mutation has spread in more population or is spreading more rapidly.
Is there any way to Identify amino acid mutations spread in large population with .pb fileand the -matutils -summary command? I can only get a tsv file with nucleotide mutation with their number of occurrences. So, I was wondering if we could get the same for amino acid mutation/mutation in covid-19 genes (ORF1ab, S,E etc etc ) Context: I am studying the Covid-19 mutation in a specific country with around 3500 samples to identify which mutation has spread in more population or is spreading more rapidly.