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ydLiu-HIT / deSALT

deSALT - De Bruijn graph-based Spliced Aligner for Long Transcriptome reads
MIT License
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Hard limit on number of threads #18

Closed baraaorabi closed 4 years ago

baraaorabi commented 4 years ago

Why is 48 the upper limit for number of threads? https://github.com/ydLiu-HIT/deSALT/blob/264ab46a4fd29cc85afaf9d7acee9a1f19d4472e/src/read_seeding.c#L1582

ydLiu-HIT commented 4 years ago

Hi, When deSALT was designed, considering the limitation of threads and memory of my machine, I set the limit. You can remove the limitation from line 1580-1584 according to your hardware environment.

Best.