Open gdevenyi opened 1 year ago
setting profile.config.html.inline = False
profile.config.html.inline = False
and then profile.to_file("all_data/longi_report.html")'
profile.to_file("all_data/longi_report.html")'
assets are stored in longi_report_assets/
longi_report_assets/
however the html file in several places has src=_assets
src=_assets
Loading the HTML file gives a broken page
Correct prefix is used.
N/A
profile = ProfileReport(data, title="Longitudinal profiling", minimal=True) profile.config.html.inline = False profile.to_file("all_data/longi_report.html")
v4.1.2
# packages in environment at /gpfs/fs1/home/m/mchakrav/gdevenyi/mambaforge: # # Name Version Build Channel _libgcc_mutex 0.1 conda_forge conda-forge _openmp_mutex 4.5 2_gnu conda-forge aiohttp 3.8.4 py310h1fa729e_0 conda-forge aiosignal 1.3.1 pyhd8ed1ab_0 conda-forge alsa-lib 1.2.8 h166bdaf_0 conda-forge aom 3.5.0 h27087fc_0 conda-forge argcomplete 3.0.5 pyhd8ed1ab_0 conda-forge arrow-cpp 11.0.0 ha770c72_13_cpu conda-forge asttokens 2.2.1 pyhd8ed1ab_0 conda-forge async-timeout 4.0.2 pyhd8ed1ab_0 conda-forge attr 2.5.1 h166bdaf_1 conda-forge attrs 22.2.0 pyh71513ae_0 conda-forge aws-c-auth 0.6.26 hf365957_1 conda-forge aws-c-cal 0.5.21 h48707d8_2 conda-forge aws-c-common 0.8.14 h0b41bf4_0 conda-forge aws-c-compression 0.2.16 h03acc5a_5 conda-forge aws-c-event-stream 0.2.20 h00877a2_4 conda-forge aws-c-http 0.7.6 hf342b9f_0 conda-forge aws-c-io 0.13.19 h5b20300_3 conda-forge aws-c-mqtt 0.8.6 hc4349f7_12 conda-forge aws-c-s3 0.2.7 h909e904_1 conda-forge aws-c-sdkutils 0.1.8 h03acc5a_0 conda-forge aws-checksums 0.1.14 h03acc5a_5 conda-forge aws-crt-cpp 0.19.8 hf7fbfca_12 conda-forge aws-sdk-cpp 1.10.57 h17c43bd_8 conda-forge backcall 0.2.0 pyh9f0ad1d_0 conda-forge backports 1.0 pyhd8ed1ab_3 conda-forge backports.functools_lru_cache 1.6.4 pyhd8ed1ab_0 conda-forge backports.zoneinfo 0.2.1 py310hff52083_7 conda-forge boltons 23.0.0 pyhd8ed1ab_0 conda-forge brotli 1.0.9 h166bdaf_8 conda-forge brotli-bin 1.0.9 h166bdaf_8 conda-forge brotlipy 0.7.0 py310h5764c6d_1005 conda-forge bzip2 1.0.8 h7f98852_4 conda-forge c-ares 1.18.1 h7f98852_0 conda-forge ca-certificates 2023.5.7 hbcca054_0 conda-forge cairo 1.16.0 ha61ee94_1014 conda-forge certifi 2023.5.7 pyhd8ed1ab_0 conda-forge cffi 1.15.1 py310h255011f_3 conda-forge charset-normalizer 2.1.1 pyhd8ed1ab_0 conda-forge click 8.1.3 unix_pyhd8ed1ab_2 conda-forge colorama 0.4.6 pyhd8ed1ab_0 conda-forge comm 0.1.3 pyhd8ed1ab_0 conda-forge conda 23.3.1 py310hff52083_0 conda-forge conda-package-handling 2.0.2 pyh38be061_0 conda-forge conda-package-streaming 0.7.0 pyhd8ed1ab_1 conda-forge contourpy 1.0.7 py310hdf3cbec_0 conda-forge cryptography 40.0.1 py310h34c0648_0 conda-forge curl 7.88.1 hdc1c0ab_1 conda-forge cycler 0.11.0 pyhd8ed1ab_0 conda-forge dbus 1.13.6 h5008d03_3 conda-forge debugpy 1.6.7 py310heca2aa9_0 conda-forge decorator 5.1.1 pyhd8ed1ab_0 conda-forge double-conversion 3.2.0 h27087fc_1 conda-forge eigen 3.4.0 h4bd325d_0 conda-forge executing 1.2.0 pyhd8ed1ab_0 conda-forge expat 2.5.0 hcb278e6_1 conda-forge ffmpeg 5.1.2 gpl_h8dda1f0_106 conda-forge fftw 3.3.10 nompi_hf0379b8_106 conda-forge fmt 9.1.0 h924138e_0 conda-forge font-ttf-dejavu-sans-mono 2.37 hab24e00_0 conda-forge font-ttf-inconsolata 3.000 h77eed37_0 conda-forge font-ttf-source-code-pro 2.038 h77eed37_0 conda-forge font-ttf-ubuntu 0.83 hab24e00_0 conda-forge fontconfig 2.14.2 h14ed4e7_0 conda-forge fonts-conda-ecosystem 1 0 conda-forge fonts-conda-forge 1 0 conda-forge fonttools 4.39.3 py310h1fa729e_0 conda-forge freetype 2.12.1 hca18f0e_1 conda-forge frozenlist 1.3.3 py310h5764c6d_0 conda-forge gettext 0.21.1 h27087fc_0 conda-forge gflags 2.2.2 he1b5a44_1004 conda-forge gl2ps 1.4.2 h0708190_0 conda-forge glew 2.1.0 h9c3ff4c_2 conda-forge glib 2.74.1 h6239696_1 conda-forge glib-tools 2.74.1 h6239696_1 conda-forge glog 0.6.0 h6f12383_0 conda-forge gmp 6.2.1 h58526e2_0 conda-forge gnutls 3.7.8 hf3e180e_0 conda-forge graphite2 1.3.13 h58526e2_1001 conda-forge gst-plugins-base 1.22.0 h4243ec0_2 conda-forge gstreamer 1.22.0 h25f0c4b_2 conda-forge gstreamer-orc 0.4.33 h166bdaf_0 conda-forge harfbuzz 6.0.0 h8e241bc_0 conda-forge hdf4 4.2.15 h9772cbc_5 conda-forge hdf5 1.12.2 nompi_h4df4325_101 conda-forge htmlmin 0.1.12 py_1 conda-forge icu 70.1 h27087fc_0 conda-forge idna 3.4 pyhd8ed1ab_0 conda-forge imagehash 4.3.1 pyhd8ed1ab_0 conda-forge importlib-metadata 6.1.0 pyha770c72_0 conda-forge importlib_metadata 6.1.0 hd8ed1ab_0 conda-forge importlib_resources 5.12.0 pyhd8ed1ab_0 conda-forge ipykernel 6.23.1 pyh210e3f2_0 conda-forge ipython 8.12.0 pyh41d4057_0 conda-forge ipywidgets 8.0.6 pyhd8ed1ab_0 conda-forge itk 5.3.0 py310hfdc917e_0 conda-forge itk-core 5.3.0 pypi_0 pypi itk-filtering 5.3.0 pypi_0 pypi itk-numerics 5.3.0 pypi_0 pypi itk-registration 5.3.0 pypi_0 pypi itk-segmentation 5.3.0 pypi_0 pypi jack 1.9.22 h11f4161_0 conda-forge jedi 0.18.2 pyhd8ed1ab_0 conda-forge jinja2 3.1.2 pyhd8ed1ab_1 conda-forge joblib 1.2.0 pyhd8ed1ab_0 conda-forge jpeg 9e h0b41bf4_3 conda-forge jsoncpp 1.9.5 h4bd325d_1 conda-forge jsonpatch 1.32 pyhd8ed1ab_0 conda-forge jsonpointer 2.0 py_0 conda-forge jupyter_client 8.2.0 pyhd8ed1ab_0 conda-forge jupyter_core 5.3.0 py310hff52083_0 conda-forge jupyterlab_widgets 3.0.7 pyhd8ed1ab_1 conda-forge keyutils 1.6.1 h166bdaf_0 conda-forge kiwisolver 1.4.4 py310hbf28c38_1 conda-forge krb5 1.20.1 h81ceb04_0 conda-forge lame 3.100 h166bdaf_1003 conda-forge lcms2 2.14 h6ed2654_0 conda-forge ld_impl_linux-64 2.40 h41732ed_0 conda-forge lerc 4.0.0 h27087fc_0 conda-forge libabseil 20230125.0 cxx17_hcb278e6_1 conda-forge libaec 1.0.6 hcb278e6_1 conda-forge libarchive 3.6.2 h3d51595_0 conda-forge libarrow 11.0.0 h93537a5_13_cpu conda-forge libblas 3.9.0 16_linux64_openblas conda-forge libbrotlicommon 1.0.9 h166bdaf_8 conda-forge libbrotlidec 1.0.9 h166bdaf_8 conda-forge libbrotlienc 1.0.9 h166bdaf_8 conda-forge libcap 2.67 he9d0100_0 conda-forge libcblas 3.9.0 16_linux64_openblas conda-forge libclang 15.0.7 default_had23c3d_1 conda-forge libclang13 15.0.7 default_h3e3d535_1 conda-forge libcrc32c 1.1.2 h9c3ff4c_0 conda-forge libcups 2.3.3 h36d4200_3 conda-forge libcurl 7.88.1 hdc1c0ab_1 conda-forge libdb 6.2.32 h9c3ff4c_0 conda-forge libdeflate 1.14 h166bdaf_0 conda-forge libdrm 2.4.114 h166bdaf_0 conda-forge libedit 3.1.20191231 he28a2e2_2 conda-forge libev 4.33 h516909a_1 conda-forge libevent 2.1.10 h28343ad_4 conda-forge libexpat 2.5.0 hcb278e6_1 conda-forge libffi 3.4.2 h7f98852_5 conda-forge libflac 1.4.2 h27087fc_0 conda-forge libgcc-ng 12.2.0 h65d4601_19 conda-forge libgcrypt 1.10.1 h166bdaf_0 conda-forge libgfortran-ng 12.2.0 h69a702a_19 conda-forge libgfortran5 12.2.0 h337968e_19 conda-forge libglib 2.74.1 h606061b_1 conda-forge libglu 9.0.0 he1b5a44_1001 conda-forge libgomp 12.2.0 h65d4601_19 conda-forge libgoogle-cloud 2.8.0 h0bc5f78_1 conda-forge libgpg-error 1.46 h620e276_0 conda-forge libgrpc 1.52.1 hcf146ea_1 conda-forge libhwloc 2.9.0 hd6dc26d_0 conda-forge libiconv 1.17 h166bdaf_0 conda-forge libidn2 2.3.4 h166bdaf_0 conda-forge libitk 5.3.0 hcedbc38_0 conda-forge liblapack 3.9.0 16_linux64_openblas conda-forge libllvm15 15.0.7 hadd5161_1 conda-forge libmamba 1.4.1 hcea66bb_0 conda-forge libmambapy 1.4.1 py310h1428755_0 conda-forge libnetcdf 4.8.1 nompi_h261ec11_106 conda-forge libnghttp2 1.52.0 h61bc06f_0 conda-forge libnsl 2.0.0 h7f98852_0 conda-forge libnuma 2.0.16 h0b41bf4_1 conda-forge libogg 1.3.4 h7f98852_1 conda-forge libopenblas 0.3.21 pthreads_h78a6416_3 conda-forge libopus 1.3.1 h7f98852_1 conda-forge libpciaccess 0.17 h166bdaf_0 conda-forge libpng 1.6.39 h753d276_0 conda-forge libpq 15.2 hb675445_0 conda-forge libprotobuf 3.21.12 h3eb15da_0 conda-forge libsndfile 1.2.0 hb75c966_0 conda-forge libsodium 1.0.18 h36c2ea0_1 conda-forge libsolv 0.7.23 h3eb15da_0 conda-forge libsqlite 3.40.0 h753d276_0 conda-forge libssh2 1.10.0 hf14f497_3 conda-forge libstdcxx-ng 12.2.0 h46fd767_19 conda-forge libsystemd0 253 h8c4010b_1 conda-forge libtasn1 4.19.0 h166bdaf_0 conda-forge libtheora 1.1.1 h7f98852_1005 conda-forge libthrift 0.18.1 h5e4af38_0 conda-forge libtiff 4.4.0 h82bc61c_5 conda-forge libtool 2.4.7 h27087fc_0 conda-forge libudev1 253 h0b41bf4_1 conda-forge libunistring 0.9.10 h7f98852_0 conda-forge libutf8proc 2.8.0 h166bdaf_0 conda-forge libuuid 2.38.1 h0b41bf4_0 conda-forge libva 2.18.0 h0b41bf4_0 conda-forge libvorbis 1.3.7 h9c3ff4c_0 conda-forge libvpx 1.11.0 h9c3ff4c_3 conda-forge libwebp-base 1.3.0 h0b41bf4_0 conda-forge libxcb 1.13 h7f98852_1004 conda-forge libxkbcommon 1.5.0 h79f4944_1 conda-forge libxml2 2.10.3 hca2bb57_4 conda-forge libzip 1.9.2 hc929e4a_1 conda-forge libzlib 1.2.13 h166bdaf_4 conda-forge loguru 0.6.0 py310hff52083_2 conda-forge lz4-c 1.9.4 hcb278e6_0 conda-forge lzo 2.10 h516909a_1000 conda-forge mamba 1.4.1 py310h51d5547_0 conda-forge markupsafe 2.1.2 py310h1fa729e_0 conda-forge matplotlib-base 3.6.3 py310he60537e_0 conda-forge matplotlib-inline 0.1.6 pyhd8ed1ab_0 conda-forge mizani 0.8.1 pyhd8ed1ab_1 conda-forge mpg123 1.31.3 hcb278e6_0 conda-forge multidict 6.0.4 py310h1fa729e_0 conda-forge multimethod 1.4 py_0 conda-forge munkres 1.1.4 pyh9f0ad1d_0 conda-forge mysql-common 8.0.32 ha901b37_1 conda-forge mysql-libs 8.0.32 hd7da12d_1 conda-forge ncurses 6.3 h27087fc_1 conda-forge nest-asyncio 1.5.6 pyhd8ed1ab_0 conda-forge nettle 3.8.1 hc379101_1 conda-forge networkx 3.1 pyhd8ed1ab_0 conda-forge nlohmann_json 3.11.2 h27087fc_0 conda-forge nspr 4.35 h27087fc_0 conda-forge nss 3.89 he45b914_0 conda-forge numpy 1.23.5 py310h53a5b5f_0 conda-forge openh264 2.3.1 hcb278e6_2 conda-forge openjpeg 2.5.0 h7d73246_1 conda-forge openssl 3.1.0 hd590300_3 conda-forge orc 1.8.3 hfdbbad2_0 conda-forge p11-kit 0.24.1 hc5aa10d_0 conda-forge packaging 23.0 pyhd8ed1ab_0 conda-forge palettable 3.3.0 py_0 conda-forge pandas 1.5.3 py310h9b08913_1 conda-forge parquet-cpp 1.5.1 2 conda-forge parso 0.8.3 pyhd8ed1ab_0 conda-forge patsy 0.5.3 pyhd8ed1ab_0 conda-forge pcre2 10.40 hc3806b6_0 conda-forge pexpect 4.8.0 pyh1a96a4e_2 conda-forge phik 0.12.3 py310h7270e96_0 conda-forge pickleshare 0.7.5 py_1003 conda-forge pillow 9.2.0 py310h454ad03_3 conda-forge pip 23.0.1 pyhd8ed1ab_0 conda-forge pipx 1.2.0 pyhd8ed1ab_0 conda-forge pixman 0.40.0 h36c2ea0_0 conda-forge platformdirs 3.2.0 pyhd8ed1ab_0 conda-forge plotnine 0.10.1 pyhd8ed1ab_2 conda-forge pluggy 1.0.0 pyhd8ed1ab_5 conda-forge polars 0.17.13 py310hcb5633a_0 conda-forge pooch 1.7.0 pyha770c72_3 conda-forge proj 9.1.0 h93bde94_0 conda-forge prompt-toolkit 3.0.38 pyha770c72_0 conda-forge prompt_toolkit 3.0.38 hd8ed1ab_0 conda-forge psutil 5.9.5 py310h1fa729e_0 conda-forge pthread-stubs 0.4 h36c2ea0_1001 conda-forge ptyprocess 0.7.0 pyhd3deb0d_0 conda-forge pugixml 1.11.4 h9c3ff4c_0 conda-forge pulseaudio 16.1 hcb278e6_3 conda-forge pulseaudio-client 16.1 h5195f5e_3 conda-forge pulseaudio-daemon 16.1 ha8d29e2_3 conda-forge pure_eval 0.2.2 pyhd8ed1ab_0 conda-forge pyarrow 11.0.0 py310h633f555_13_cpu conda-forge pybind11-abi 4 hd8ed1ab_3 conda-forge pycosat 0.6.4 py310h5764c6d_1 conda-forge pycparser 2.21 pyhd8ed1ab_0 conda-forge pydantic 1.10.7 py310h1fa729e_0 conda-forge pygments 2.14.0 pyhd8ed1ab_0 conda-forge pyopenssl 23.1.1 pyhd8ed1ab_0 conda-forge pyparsing 3.0.9 pyhd8ed1ab_0 conda-forge pysocks 1.7.1 pyha2e5f31_6 conda-forge python 3.10.10 he550d4f_0_cpython conda-forge python-dateutil 2.8.2 pyhd8ed1ab_0 conda-forge python-tzdata 2023.3 pyhd8ed1ab_0 conda-forge python_abi 3.10 3_cp310 conda-forge pytz 2023.3 pyhd8ed1ab_0 conda-forge pywavelets 1.4.1 py310h0a54255_0 conda-forge pyyaml 6.0 py310h5764c6d_5 conda-forge pyzmq 25.0.2 py310h059b190_0 conda-forge qt-main 5.15.8 h5d23da1_6 conda-forge re2 2023.02.02 hcb278e6_0 conda-forge readline 8.2 h8228510_1 conda-forge reproc 14.2.4 h0b41bf4_0 conda-forge reproc-cpp 14.2.4 hcb278e6_0 conda-forge requests 2.28.2 pyhd8ed1ab_1 conda-forge ruamel.yaml 0.17.21 py310h1fa729e_3 conda-forge ruamel.yaml.clib 0.2.7 py310h1fa729e_1 conda-forge s2n 1.3.41 h3358134_0 conda-forge scikit-learn 1.2.2 py310h41b6a48_1 conda-forge scipy 1.9.3 py310hdfbd76f_2 conda-forge seaborn-base 0.12.2 pyhd8ed1ab_0 conda-forge setuptools 67.6.1 pyhd8ed1ab_0 conda-forge simpleitk 2.2.1 py310h2b9ea3a_1 conda-forge six 1.16.0 pyh6c4a22f_0 conda-forge snappy 1.1.10 h9fff704_0 conda-forge sqlite 3.40.0 h4ff8645_0 conda-forge stack_data 0.6.2 pyhd8ed1ab_0 conda-forge statadict 1.1.0 pypi_0 pypi statsmodels 0.13.5 py310hde88566_2 conda-forge svt-av1 1.4.1 hcb278e6_0 conda-forge sweetviz 2.1.4 pyhd8ed1ab_0 conda-forge tangled-up-in-unicode 0.2.0 pyhd8ed1ab_0 conda-forge tbb 2021.8.0 hf52228f_0 conda-forge tbb-devel 2021.8.0 hf52228f_0 conda-forge threadpoolctl 3.1.0 pyh8a188c0_0 conda-forge tk 8.6.12 h27826a3_0 conda-forge toolz 0.12.0 pyhd8ed1ab_0 conda-forge tornado 6.3.2 py310h2372a71_0 conda-forge tqdm 4.64.1 pyhd8ed1ab_0 conda-forge traitlets 5.9.0 pyhd8ed1ab_0 conda-forge typeguard 2.13.3 pyhd8ed1ab_0 conda-forge typing-extensions 4.5.0 hd8ed1ab_0 conda-forge typing_extensions 4.5.0 pyha770c72_0 conda-forge tzdata 2023c h71feb2d_0 conda-forge ucx 1.14.0 ha0ee010_0 conda-forge unicodedata2 15.0.0 py310h5764c6d_0 conda-forge urllib3 1.26.15 pyhd8ed1ab_0 conda-forge userpath 1.7.0 pyhd8ed1ab_0 conda-forge utfcpp 3.2.3 ha770c72_0 conda-forge visions 0.7.5 pyhd8ed1ab_0 conda-forge vtk 9.2.5 qt_py310hc895abb_200 conda-forge wcwidth 0.2.6 pyhd8ed1ab_0 conda-forge wheel 0.40.0 pyhd8ed1ab_0 conda-forge widgetsnbextension 4.0.7 pyhd8ed1ab_0 conda-forge wslink 1.10.1 pyhd8ed1ab_0 conda-forge x264 1!164.3095 h166bdaf_2 conda-forge x265 3.5 h924138e_3 conda-forge xcb-util 0.4.0 h166bdaf_0 conda-forge xcb-util-image 0.4.0 h166bdaf_0 conda-forge xcb-util-keysyms 0.4.0 h166bdaf_0 conda-forge xcb-util-renderutil 0.3.9 h166bdaf_0 conda-forge xcb-util-wm 0.4.1 h166bdaf_0 conda-forge xkeyboard-config 2.38 h0b41bf4_0 conda-forge xorg-fixesproto 5.0 h7f98852_1002 conda-forge xorg-kbproto 1.0.7 h7f98852_1002 conda-forge xorg-libice 1.0.10 h7f98852_0 conda-forge xorg-libsm 1.2.3 hd9c2040_1000 conda-forge xorg-libx11 1.8.4 h0b41bf4_0 conda-forge xorg-libxau 1.0.9 h7f98852_0 conda-forge xorg-libxdmcp 1.1.3 h7f98852_0 conda-forge xorg-libxext 1.3.4 h0b41bf4_2 conda-forge xorg-libxfixes 5.0.3 h7f98852_1004 conda-forge xorg-libxrender 0.9.10 h7f98852_1003 conda-forge xorg-libxt 1.2.1 h7f98852_2 conda-forge xorg-renderproto 0.11.1 h7f98852_1002 conda-forge xorg-xextproto 7.3.0 h0b41bf4_1003 conda-forge xorg-xproto 7.0.31 h7f98852_1007 conda-forge xz 5.2.6 h166bdaf_0 conda-forge yaml 0.2.5 h7f98852_2 conda-forge yaml-cpp 0.7.0 h27087fc_2 conda-forge yarl 1.8.2 py310h5764c6d_0 conda-forge ydata-profiling 4.1.2 pyhd8ed1ab_0 conda-forge zeromq 4.3.4 h9c3ff4c_1 conda-forge zipp 3.15.0 pyhd8ed1ab_0 conda-forge zlib 1.2.13 h166bdaf_4 conda-forge zstandard 0.19.0 py310hdeb6495_1 conda-forge zstd 1.5.2 h3eb15da_6 conda-forge
Ubuntu 22.04
Hi I was looking at this issue as part of Hactoberfest and when I tried to reproduce this bug but I couldn't. Was it resolve?
Thanks
Current Behaviour
setting
profile.config.html.inline = False
and then
profile.to_file("all_data/longi_report.html")'
assets are stored in
longi_report_assets/
however the html file in several places has
src=_assets
Loading the HTML file gives a broken page
Expected Behaviour
Correct prefix is used.
Data Description
N/A
Code that reproduces the bug
pandas-profiling version
v4.1.2
Dependencies
OS
Ubuntu 22.04
Checklist