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ydataai / ydata-profiling

1 Line of code data quality profiling & exploratory data analysis for Pandas and Spark DataFrames.
https://docs.profiling.ydata.ai
MIT License
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Bug Report: Confusing Error with Geometry Column #1567

Closed saulshanabrook closed 5 months ago

saulshanabrook commented 6 months ago

Current Behaviour

When I create a report on a dataset with geometry column, like from GeoPandas, it will raise a confusing error:

Traceback (most recent call last):
  File "/Users/saul/p/property-data/tmp.py", line 15, in <module>
    report.to_file("report.html")
  File "/usr/local/Caskroom/miniconda/base/envs/property-data/lib/python3.11/site-packages/typeguard/__init__.py", line 1033, in wrapper
    retval = func(*args, **kwargs)
             ^^^^^^^^^^^^^^^^^^^^^
  File "/usr/local/Caskroom/miniconda/base/envs/property-data/lib/python3.11/site-packages/ydata_profiling/profile_report.py", line 350, in to_file
    data = self.to_html()
           ^^^^^^^^^^^^^^
  File "/usr/local/Caskroom/miniconda/base/envs/property-data/lib/python3.11/site-packages/typeguard/__init__.py", line 1033, in wrapper
    retval = func(*args, **kwargs)
             ^^^^^^^^^^^^^^^^^^^^^
  File "/usr/local/Caskroom/miniconda/base/envs/property-data/lib/python3.11/site-packages/ydata_profiling/profile_report.py", line 461, in to_html
    return self.html
           ^^^^^^^^^
  File "/usr/local/Caskroom/miniconda/base/envs/property-data/lib/python3.11/site-packages/typeguard/__init__.py", line 1033, in wrapper
    retval = func(*args, **kwargs)
             ^^^^^^^^^^^^^^^^^^^^^
  File "/usr/local/Caskroom/miniconda/base/envs/property-data/lib/python3.11/site-packages/ydata_profiling/profile_report.py", line 272, in html
    self._html = self._render_html()
                 ^^^^^^^^^^^^^^^^^^^
  File "/usr/local/Caskroom/miniconda/base/envs/property-data/lib/python3.11/site-packages/typeguard/__init__.py", line 1033, in wrapper
    retval = func(*args, **kwargs)
             ^^^^^^^^^^^^^^^^^^^^^
  File "/usr/local/Caskroom/miniconda/base/envs/property-data/lib/python3.11/site-packages/ydata_profiling/profile_report.py", line 380, in _render_html
    report = self.report
             ^^^^^^^^^^^
  File "/usr/local/Caskroom/miniconda/base/envs/property-data/lib/python3.11/site-packages/typeguard/__init__.py", line 1033, in wrapper
    retval = func(*args, **kwargs)
             ^^^^^^^^^^^^^^^^^^^^^
  File "/usr/local/Caskroom/miniconda/base/envs/property-data/lib/python3.11/site-packages/ydata_profiling/profile_report.py", line 266, in report
    self._report = get_report_structure(self.config, self.description_set)
                   ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
  File "/usr/local/Caskroom/miniconda/base/envs/property-data/lib/python3.11/site-packages/ydata_profiling/report/structure/report.py", line 383, in get_report_structure
    render_variables_section(config, summary),
    ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
  File "/usr/local/Caskroom/miniconda/base/envs/property-data/lib/python3.11/site-packages/ydata_profiling/report/structure/report.py", line 159, in render_variables_section
    template_variables.update(render_map_type(config, template_variables))
                              ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
  File "/usr/local/Caskroom/miniconda/base/envs/property-data/lib/python3.11/site-packages/ydata_profiling/report/structure/variables/render_categorical.py", line 340, in render_categorical
    template_variables = render_common(config, summary)
                         ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
  File "/usr/local/Caskroom/miniconda/base/envs/property-data/lib/python3.11/site-packages/ydata_profiling/report/structure/variables/render_common.py", line 20, in render_common
    freqtable=summary["value_counts_index_sorted"],
              ~~~~~~~^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
KeyError: 'value_counts_index_sorted

Expected Behaviour

It's fine that ydata doesn't support geodata, but it would nice to either to drop this column or tell me I should drop it beforehand.

Data Description

For the reproducible example, I just made some sample data. My data is available here: https://github.com/saulshanabrook/property-data

Code that reproduces the bug

import geopandas
from shapely.geometry import Point
from ydata_profiling import ProfileReport

points = [
    Point(625466, 5621289),
    Point(626082, 5621627),
    Point(627116, 5621680),
    Point(625095, 5622358),
]
gdf = geopandas.GeoDataFrame([1, 2, 3, 4], geometry=points, crs=32630)

report = ProfileReport(gdf)

report.to_file("report.html")

pandas-profiling version

v4.1.1

Dependencies

$ conda list
# packages in environment at /usr/local/Caskroom/miniconda/base/envs/property-data:
#
# Name                    Version                   Build  Channel
aiofiles                  0.8.0              pyhd8ed1ab_0    conda-forge
altair                    5.0.0rc1                 pypi_0    pypi
anyio                     3.6.2              pyhd8ed1ab_0    conda-forge
appnope                   0.1.3              pyhd8ed1ab_0    conda-forge
argon2-cffi               21.3.0             pyhd8ed1ab_0    conda-forge
argon2-cffi-bindings      21.2.0          py311h5547dcb_3    conda-forge
arviz                     0.15.1             pyhd8ed1ab_0    conda-forge
asgi-csrf                 0.9                pyhd8ed1ab_0    conda-forge
asgiref                   3.5.2              pyhd8ed1ab_0    conda-forge
asttokens                 2.2.1              pyhd8ed1ab_0    conda-forge
atk-1.0                   2.38.0               h1d18e73_1    conda-forge
attrs                     22.2.0             pyh71513ae_0    conda-forge
babel                     2.12.1             pyhd8ed1ab_1    conda-forge
backcall                  0.2.0              pyh9f0ad1d_0    conda-forge
backports                 1.0                pyhd8ed1ab_3    conda-forge
backports.functools_lru_cache 1.6.4              pyhd8ed1ab_0    conda-forge
bambi                     0.10.0             pyhd8ed1ab_0    conda-forge
beautifulsoup4            4.12.2             pyha770c72_0    conda-forge
blas                      2.116                  openblas    conda-forge
blas-devel                3.9.0           16_osx64_openblas    conda-forge
bleach                    6.0.0              pyhd8ed1ab_0    conda-forge
blosc                     1.21.2               hebb52c4_0    conda-forge
boost-cpp                 1.78.0               h31500c2_2    conda-forge
branca                    0.6.0              pyhd8ed1ab_0    conda-forge
brotli                    1.0.9                hb7f2c08_8    conda-forge
brotli-bin                1.0.9                hb7f2c08_8    conda-forge
brotlipy                  0.7.0           py311h5547dcb_1005    conda-forge
bzip2                     1.0.8                h0d85af4_4    conda-forge
c-ares                    1.18.1               h0d85af4_0    conda-forge
c-compiler                1.5.2                hbf74d83_0    conda-forge
ca-certificates           2022.12.7            h033912b_0    conda-forge
cached-property           1.5.2                hd8ed1ab_1    conda-forge
cached_property           1.5.2              pyha770c72_1    conda-forge
cachetools                5.3.0              pyhd8ed1ab_0    conda-forge
cairo                     1.16.0            h904041c_1014    conda-forge
cctools                   973.0.1             h76f1dac_13    conda-forge
cctools_osx-64            973.0.1             hcc6d90d_13    conda-forge
certifi                   2022.12.7          pyhd8ed1ab_0    conda-forge
cffi                      1.15.1          py311ha86e640_3    conda-forge
cfitsio                   4.2.0                hd56cc12_0    conda-forge
charset-normalizer        3.1.0              pyhd8ed1ab_0    conda-forge
clang                     14.0.6               h694c41f_0    conda-forge
clang-14                  14.0.6          default_h55ffa42_0    conda-forge
clang_osx-64              14.0.6               h3113cd8_6    conda-forge
clangxx                   14.0.6          default_h55ffa42_0    conda-forge
clangxx_osx-64            14.0.6               h6f97653_6    conda-forge
click                     8.1.3                    pypi_0    pypi
click-default-group-wheel 1.2.2              pyhd8ed1ab_0    conda-forge
click-plugins             1.1.1                      py_0    conda-forge
cligj                     0.7.2              pyhd8ed1ab_1    conda-forge
cloudpickle               2.2.1              pyhd8ed1ab_0    conda-forge
colorama                  0.4.6              pyhd8ed1ab_0    conda-forge
comm                      0.1.3              pyhd8ed1ab_0    conda-forge
compiler-rt               14.0.6               h613da45_0    conda-forge
compiler-rt_osx-64        14.0.6               hab78ec2_0    conda-forge
cons                      0.4.5              pyhd8ed1ab_0    conda-forge
contourpy                 1.0.7           py311hd2070f0_0    conda-forge
cryptography              40.0.2          py311h61927ef_0    conda-forge
curl                      8.0.1                h1fead75_0    conda-forge
cxx-compiler              1.5.2                hb8565cd_0    conda-forge
cycler                    0.11.0             pyhd8ed1ab_0    conda-forge
datasette                 0.64.2             pyhd8ed1ab_0    conda-forge
datasette-geojson         0.4.0                    pypi_0    pypi
datasette-geojson-map     0.4.0                    pypi_0    pypi
datasette-leaflet         0.2.2                    pypi_0    pypi
datasette-leaflet-geojson 0.8                      pypi_0    pypi
dbfread                   2.0.7                    pypi_0    pypi
debugpy                   1.6.7           py311h814d153_0    conda-forge
decorator                 5.1.1              pyhd8ed1ab_0    conda-forge
defusedxml                0.7.1              pyhd8ed1ab_0    conda-forge
entrypoints               0.4                pyhd8ed1ab_0    conda-forge
et_xmlfile                1.1.0              pyhd8ed1ab_0    conda-forge
etuples                   0.3.8              pyhd8ed1ab_0    conda-forge
executing                 1.2.0              pyhd8ed1ab_0    conda-forge
expat                     2.5.0                hf0c8a7f_1    conda-forge
fastprogress              1.0.3              pyhd8ed1ab_0    conda-forge
filelock                  3.11.0             pyhd8ed1ab_0    conda-forge
fiona                     1.9.2                    pypi_0    pypi
flit-core                 3.8.0              pyhd8ed1ab_0    conda-forge
folium                    0.14.0             pyhd8ed1ab_0    conda-forge
font-ttf-dejavu-sans-mono 2.37                 hab24e00_0    conda-forge
font-ttf-inconsolata      3.000                h77eed37_0    conda-forge
font-ttf-source-code-pro  2.038                h77eed37_0    conda-forge
font-ttf-ubuntu           0.83                 hab24e00_0    conda-forge
fontconfig                2.14.2               h5bb23bf_0    conda-forge
fonts-conda-ecosystem     1                             0    conda-forge
fonts-conda-forge         1                             0    conda-forge
fonttools                 4.39.3          py311h5547dcb_0    conda-forge
formulae                  0.3.4              pyhd8ed1ab_0    conda-forge
freetype                  2.12.1               h3f81eb7_1    conda-forge
freexl                    1.0.6                hb7f2c08_1    conda-forge
fribidi                   1.0.10               hbcb3906_0    conda-forge
gdal                      3.6.2           py311h619941e_9    conda-forge
gdk-pixbuf                2.42.10              he00a9fc_0    conda-forge
geojson                   3.0.1                    pypi_0    pypi
geopandas                 0.12.2             pyhd8ed1ab_0    conda-forge
geopandas-base            0.12.2             pyha770c72_0    conda-forge
geos                      3.11.1               hf0c8a7f_0    conda-forge
geotiff                   1.7.1                hd690177_6    conda-forge
gettext                   0.21.1               h8a4c099_0    conda-forge
giflib                    5.2.1                hb7f2c08_3    conda-forge
googlemaps                4.10.0                   pypi_0    pypi
graphite2                 1.3.13            h2e338ed_1001    conda-forge
graphviz                  7.1.0                hc51f7b9_0    conda-forge
gtk2                      2.24.33              h7c1209e_2    conda-forge
gts                       0.7.6                hccb3bdf_2    conda-forge
h11                       0.14.0             pyhd8ed1ab_0    conda-forge
h2                        4.1.0              pyhd8ed1ab_0    conda-forge
h5netcdf                  1.1.0              pyhd8ed1ab_1    conda-forge
h5py                      3.8.0           nompi_py311h777de7a_100    conda-forge
harfbuzz                  6.0.0                h08f8713_0    conda-forge
hdf4                      4.2.15               h7aa5921_5    conda-forge
hdf5                      1.12.2          nompi_h48135f9_101    conda-forge
hpack                     4.0.0              pyh9f0ad1d_0    conda-forge
htmlmin                   0.1.12                     py_1    conda-forge
httpcore                  0.17.0             pyhd8ed1ab_0    conda-forge
httpx                     0.24.0             pyhd8ed1ab_1    conda-forge
hupper                    1.12               pyhd8ed1ab_0    conda-forge
hyperframe                6.0.1              pyhd8ed1ab_0    conda-forge
icu                       70.1                 h96cf925_0    conda-forge
idna                      3.4                pyhd8ed1ab_0    conda-forge
imagehash                 4.3.1              pyhd8ed1ab_0    conda-forge
importlib-metadata        6.4.1              pyha770c72_0    conda-forge
importlib_metadata        6.4.1                hd8ed1ab_0    conda-forge
importlib_resources       5.12.0             pyhd8ed1ab_0    conda-forge
ipykernel                 6.22.0             pyh736e0ef_0    conda-forge
ipython                   8.12.0             pyhd1c38e8_0    conda-forge
ipython_genutils          0.2.0                      py_1    conda-forge
ipywidgets                8.0.6                    pypi_0    pypi
itsdangerous              2.1.2              pyhd8ed1ab_0    conda-forge
janus                     1.0.0              pyhd8ed1ab_0    conda-forge
jedi                      0.18.2             pyhd8ed1ab_0    conda-forge
jinja2                    3.0.3              pyhd8ed1ab_0    conda-forge
joblib                    1.2.0              pyhd8ed1ab_0    conda-forge
jpeg                      9e                   hac89ed1_2    conda-forge
json-c                    0.16                 h01d06f9_0    conda-forge
json5                     0.9.5              pyh9f0ad1d_0    conda-forge
jsonschema                4.17.3             pyhd8ed1ab_0    conda-forge
jupyter_client            8.2.0              pyhd8ed1ab_0    conda-forge
jupyter_core              5.3.0           py311h6eed73b_0    conda-forge
jupyter_events            0.6.3              pyhd8ed1ab_0    conda-forge
jupyter_server            2.5.0              pyhd8ed1ab_0    conda-forge
jupyter_server_terminals  0.4.4              pyhd8ed1ab_1    conda-forge
jupyterlab                3.5.3              pyhd8ed1ab_0    conda-forge
jupyterlab-widgets        3.0.7                    pypi_0    pypi
jupyterlab_pygments       0.2.2              pyhd8ed1ab_0    conda-forge
jupyterlab_server         2.22.1             pyhd8ed1ab_0    conda-forge
kealib                    1.5.0                h5c1f988_0    conda-forge
kiwisolver                1.4.4           py311hd2070f0_1    conda-forge
krb5                      1.20.1               h049b76e_0    conda-forge
lcms2                     2.15                 h29502cd_0    conda-forge
ld64                      609                 hc6ad406_13    conda-forge
ld64_osx-64               609                 hfd63004_13    conda-forge
lerc                      4.0.0                hb486fe8_0    conda-forge
libaec                    1.0.6                hf0c8a7f_1    conda-forge
libblas                   3.9.0           16_osx64_openblas    conda-forge
libbrotlicommon           1.0.9                hb7f2c08_8    conda-forge
libbrotlidec              1.0.9                hb7f2c08_8    conda-forge
libbrotlienc              1.0.9                hb7f2c08_8    conda-forge
libcblas                  3.9.0           16_osx64_openblas    conda-forge
libclang-cpp14            14.0.6          default_h55ffa42_0    conda-forge
libcurl                   8.0.1                h1fead75_0    conda-forge
libcxx                    16.0.1               h71dddab_0    conda-forge
libdeflate                1.17                 hac1461d_0    conda-forge
libedit                   3.1.20191231         h0678c8f_2    conda-forge
libev                     4.33                 haf1e3a3_1    conda-forge
libexpat                  2.5.0                hf0c8a7f_1    conda-forge
libffi                    3.4.2                h0d85af4_5    conda-forge
libgd                     2.3.3                h4685329_4    conda-forge
libgdal                   3.6.2                hd7924a8_9    conda-forge
libgfortran               5.0.0           11_3_0_h97931a8_31    conda-forge
libgfortran5              12.2.0              he409387_31    conda-forge
libglib                   2.74.1               h4c723e1_1    conda-forge
libiconv                  1.17                 hac89ed1_0    conda-forge
libjpeg-turbo             2.1.4                hb7f2c08_0    conda-forge
libkml                    1.3.0             haeb80ef_1015    conda-forge
liblapack                 3.9.0           16_osx64_openblas    conda-forge
liblapacke                3.9.0           16_osx64_openblas    conda-forge
libllvm14                 14.0.6               h5b596cc_1    conda-forge
libnetcdf                 4.9.1           nompi_h56690a0_101    conda-forge
libnghttp2                1.52.0               he2ab024_0    conda-forge
libopenblas               0.3.21          openmp_h429af6e_3    conda-forge
libpng                    1.6.39               ha978bb4_0    conda-forge
libpq                     15.2                 h3640bf0_0    conda-forge
librsvg                   2.54.4               h3d48ba6_0    conda-forge
librttopo                 1.1.0               h9461dca_12    conda-forge
libsodium                 1.0.18               hbcb3906_1    conda-forge
libspatialindex           1.9.3                he49afe7_4    conda-forge
libspatialite             5.0.1               hd6e941a_23    conda-forge
libsqlite                 3.40.0               ha978bb4_0    conda-forge
libssh2                   1.10.0               h47af595_3    conda-forge
libtiff                   4.5.0                hee9004a_2    conda-forge
libtool                   2.4.7                hf0c8a7f_0    conda-forge
libwebp                   1.2.4                h70a068d_1    conda-forge
libwebp-base              1.2.4                h775f41a_0    conda-forge
libxcb                    1.13              h0d85af4_1004    conda-forge
libxml2                   2.10.3               h201ad9d_4    conda-forge
libzip                    1.9.2                h6db710c_1    conda-forge
libzlib                   1.2.13               hfd90126_4    conda-forge
llvm-openmp               16.0.1               h61d9ccf_0    conda-forge
llvm-tools                14.0.6               h5b596cc_1    conda-forge
logical-unification       0.4.5              pyhd8ed1ab_0    conda-forge
lz4-c                     1.9.4                hf0c8a7f_0    conda-forge
mapclassify               2.5.0              pyhd8ed1ab_1    conda-forge
markdown-it-py            2.2.0              pyhd8ed1ab_0    conda-forge
markupsafe                2.1.2           py311h5547dcb_0    conda-forge
matplotlib-base           3.6.3           py311h2bf763f_0    conda-forge
matplotlib-inline         0.1.6              pyhd8ed1ab_0    conda-forge
mdurl                     0.1.0              pyhd8ed1ab_0    conda-forge
mergedeep                 1.3.4              pyhd8ed1ab_0    conda-forge
minikanren                1.0.3              pyhd8ed1ab_0    conda-forge
mistune                   2.0.5              pyhd8ed1ab_0    conda-forge
mkl                       2022.2.1         h44ed08c_16952    conda-forge
mkl-service               2.4.0           py311h552c0e0_0    conda-forge
multimethod               1.4                        py_0    conda-forge
multipledispatch          0.6.0                      py_0    conda-forge
munch                     2.5.0                      py_0    conda-forge
munkres                   1.1.4              pyh9f0ad1d_0    conda-forge
nbclassic                 0.5.5              pyhb4ecaf3_1    conda-forge
nbclient                  0.7.3              pyhd8ed1ab_0    conda-forge
nbconvert                 7.3.1              pyhd8ed1ab_0    conda-forge
nbconvert-core            7.3.1              pyhd8ed1ab_0    conda-forge
nbconvert-pandoc          7.3.1              pyhd8ed1ab_0    conda-forge
nbformat                  5.8.0              pyhd8ed1ab_0    conda-forge
ncurses                   6.3                  h96cf925_1    conda-forge
nest-asyncio              1.5.6              pyhd8ed1ab_0    conda-forge
networkx                  3.1                pyhd8ed1ab_0    conda-forge
notebook                  6.5.4              pyha770c72_0    conda-forge
notebook-shim             0.2.2              pyhd8ed1ab_0    conda-forge
nspr                      4.35                 hea0b92c_0    conda-forge
nss                       3.89                 h78b00b3_0    conda-forge
numpy                     1.23.5          py311h62c7003_0    conda-forge
openblas                  0.3.21          openmp_hbefa662_3    conda-forge
openjpeg                  2.5.0                h13ac156_2    conda-forge
openpyxl                  3.1.1           py311h5547dcb_0    conda-forge
openssl                   3.1.0                hfd90126_0    conda-forge
packaging                 23.1               pyhd8ed1ab_0    conda-forge
pandas                    1.5.3           py311hd84f3f5_1    conda-forge
pandoc                    2.19.2               h694c41f_2    conda-forge
pandocfilters             1.5.0              pyhd8ed1ab_0    conda-forge
pango                     1.50.14              hbd9bf65_0    conda-forge
parso                     0.8.3              pyhd8ed1ab_0    conda-forge
patsy                     0.5.3              pyhd8ed1ab_0    conda-forge
pcre2                     10.40                h1c4e4bc_0    conda-forge
pexpect                   4.8.0              pyh1a96a4e_2    conda-forge
phik                      0.12.3          py311h0482ae9_0    conda-forge
pickleshare               0.7.5                   py_1003    conda-forge
pillow                    9.4.0           py311h5bae705_1    conda-forge
pint                      0.20.1             pyhd8ed1ab_0    conda-forge
pip                       23.1               pyhd8ed1ab_0    conda-forge
pixman                    0.40.0               hbcb3906_0    conda-forge
pkgutil-resolve-name      1.3.10             pyhd8ed1ab_0    conda-forge
platformdirs              3.2.0              pyhd8ed1ab_0    conda-forge
pluggy                    1.0.0              pyhd8ed1ab_5    conda-forge
pooch                     1.7.0              pyha770c72_3    conda-forge
poppler                   23.03.0              h6e9091c_0    conda-forge
poppler-data              0.4.12               hd8ed1ab_0    conda-forge
postgresql                15.2                 hbea33b9_0    conda-forge
proj                      9.1.1                hf909084_2    conda-forge
prometheus_client         0.16.0             pyhd8ed1ab_0    conda-forge
prompt-toolkit            3.0.38             pyha770c72_0    conda-forge
prompt_toolkit            3.0.38               hd8ed1ab_0    conda-forge
psutil                    5.9.4           py311h5547dcb_0    conda-forge
pthread-stubs             0.4               hc929b4f_1001    conda-forge
ptyprocess                0.7.0              pyhd3deb0d_0    conda-forge
pure_eval                 0.2.2              pyhd8ed1ab_0    conda-forge
pybind11-abi              4                    hd8ed1ab_3    conda-forge
pycparser                 2.21               pyhd8ed1ab_0    conda-forge
pydantic                  1.10.7          py311h5547dcb_0    conda-forge
pygments                  2.15.0             pyhd8ed1ab_0    conda-forge
pymc                      5.0.2                hd8ed1ab_0    conda-forge
pymc-base                 5.0.2              pyhd8ed1ab_0    conda-forge
pyopenssl                 23.1.1             pyhd8ed1ab_0    conda-forge
pyparsing                 3.0.9              pyhd8ed1ab_0    conda-forge
pyproj                    3.5.0           py311hdc3c720_0    conda-forge
pyrsistent                0.19.3          py311h5547dcb_0    conda-forge
pysocks                   1.7.1              pyha2e5f31_6    conda-forge
pytensor                  2.9.1           py311h814d153_0    conda-forge
pytensor-base             2.9.1           py311h814d153_0    conda-forge
python                    3.11.3          h99528f9_0_cpython    conda-forge
python-baseconv           1.2.2              pyhd8ed1ab_0    conda-forge
python-dateutil           2.8.2              pyhd8ed1ab_0    conda-forge
python-fastjsonschema     2.16.3             pyhd8ed1ab_0    conda-forge
python-graphviz           0.20.1             pyh22cad53_0    conda-forge
python-json-logger        2.0.7              pyhd8ed1ab_0    conda-forge
python-multipart          0.0.6              pyhd8ed1ab_0    conda-forge
python-tzdata             2023.3             pyhd8ed1ab_0    conda-forge
python_abi                3.11                    3_cp311    conda-forge
pytz                      2023.3             pyhd8ed1ab_0    conda-forge
pywavelets                1.4.1           py311hd5badaa_0    conda-forge
pyyaml                    6.0             py311h5547dcb_5    conda-forge
pyzmq                     25.0.2          py311habfacb3_0    conda-forge
readline                  8.2                  h9e318b2_1    conda-forge
requests                  2.28.2             pyhd8ed1ab_1    conda-forge
rfc3339-validator         0.1.4              pyhd8ed1ab_0    conda-forge
rfc3986                   2.0.0              pyhd8ed1ab_0    conda-forge
rfc3986-validator         0.1.1              pyh9f0ad1d_0    conda-forge
rich                      13.3.4             pyhd8ed1ab_0    conda-forge
rtree                     1.0.1           py311hbc1f44b_1    conda-forge
scikit-learn              1.2.2           py311hda7f639_1    conda-forge
scipy                     1.9.3           py311h939689b_2    conda-forge
seaborn                   0.12.2               hd8ed1ab_0    conda-forge
seaborn-base              0.12.2             pyhd8ed1ab_0    conda-forge
send2trash                1.8.0              pyhd8ed1ab_0    conda-forge
setuptools                67.6.1             pyhd8ed1ab_0    conda-forge
shapefile-to-sqlite       0.4.2                    pypi_0    pypi
shapely                   2.0.1           py311h781b04c_0    conda-forge
sigtool                   0.1.3                h88f4db0_0    conda-forge
six                       1.16.0             pyh6c4a22f_0    conda-forge
snappy                    1.1.10               h225ccf5_0    conda-forge
sniffio                   1.3.0              pyhd8ed1ab_0    conda-forge
soupsieve                 2.3.2.post1        pyhd8ed1ab_0    conda-forge
sqlite                    3.40.0               h9ae0607_0    conda-forge
sqlite-fts4               1.0.3                    pypi_0    pypi
sqlite-utils              3.30                     pypi_0    pypi
stack_data                0.6.2              pyhd8ed1ab_0    conda-forge
statsmodels               0.13.5          py311hd5badaa_2    conda-forge
tabulate                  0.9.0                    pypi_0    pypi
tangled-up-in-unicode     0.2.0              pyhd8ed1ab_0    conda-forge
tapi                      1100.0.11            h9ce4665_0    conda-forge
tbb                       2021.9.0             hb8565cd_0    conda-forge
terminado                 0.17.1             pyhd1c38e8_0    conda-forge
threadpoolctl             3.1.0              pyh8a188c0_0    conda-forge
tiledb                    2.13.2               h8b9cbf0_0    conda-forge
tinycss2                  1.2.1              pyhd8ed1ab_0    conda-forge
tk                        8.6.12               h5dbffcc_0    conda-forge
tomli                     2.0.1              pyhd8ed1ab_0    conda-forge
toolz                     0.12.0             pyhd8ed1ab_0    conda-forge
tornado                   6.2             py311h5547dcb_1    conda-forge
tqdm                      4.64.1             pyhd8ed1ab_0    conda-forge
traitlets                 5.9.0              pyhd8ed1ab_0    conda-forge
typeguard                 2.13.3             pyhd8ed1ab_0    conda-forge
typing-extensions         4.5.0                hd8ed1ab_0    conda-forge
typing_extensions         4.5.0              pyha770c72_0    conda-forge
tzcode                    2023c                hb7f2c08_0    conda-forge
tzdata                    2023c                h71feb2d_0    conda-forge
urllib3                   1.26.15            pyhd8ed1ab_0    conda-forge
uvicorn                   0.21.1          py311h6eed73b_0    conda-forge
visions                   0.7.5              pyhd8ed1ab_0    conda-forge
wcwidth                   0.2.6              pyhd8ed1ab_0    conda-forge
webencodings              0.5.1                      py_1    conda-forge
websocket-client          1.5.1              pyhd8ed1ab_0    conda-forge
wheel                     0.40.0             pyhd8ed1ab_0    conda-forge
widgetsnbextension        4.0.7                    pypi_0    pypi
xarray                    2023.2.0           pyhd8ed1ab_0    conda-forge
xarray-einstats           0.5.1              pyhd8ed1ab_0    conda-forge
xerces-c                  3.2.4                h2007e90_1    conda-forge
xorg-libxau               1.0.9                h35c211d_0    conda-forge
xorg-libxdmcp             1.1.3                h35c211d_0    conda-forge
xyzservices               2023.2.0           pyhd8ed1ab_0    conda-forge
xz                        5.2.6                h775f41a_0    conda-forge
yaml                      0.2.5                h0d85af4_2    conda-forge
ydata-profiling           4.1.1           py311hecd8cb5_0  
zeromq                    4.3.4                he49afe7_1    conda-forge
zipp                      3.15.0             pyhd8ed1ab_0    conda-forge
zlib                      1.2.13               hfd90126_4    conda-forge
zstd                      1.5.2                hbc0c0cd_6    conda-forge
$ pip freeze
aiofiles @ file:///home/conda/feedstock_root/build_artifacts/aiofiles_1639589461506/work
altair==5.0.0rc1
anyio @ file:///home/conda/feedstock_root/build_artifacts/anyio_1666191106763/work/dist
appnope @ file:///home/conda/feedstock_root/build_artifacts/appnope_1649077682618/work
argon2-cffi @ file:///home/conda/feedstock_root/build_artifacts/argon2-cffi_1640817743617/work
argon2-cffi-bindings @ file:///Users/runner/miniforge3/conda-bld/argon2-cffi-bindings_1666850758378/work
arviz @ file:///home/conda/feedstock_root/build_artifacts/arviz_1678789125032/work
asgi-csrf @ file:///home/conda/feedstock_root/build_artifacts/asgi-csrf_1624496164212/work
asgiref @ file:///home/conda/feedstock_root/build_artifacts/asgiref_1652752042988/work
asttokens @ file:///home/conda/feedstock_root/build_artifacts/asttokens_1670263926556/work
attrs @ file:///home/conda/feedstock_root/build_artifacts/attrs_1671632566681/work
Babel @ file:///home/conda/feedstock_root/build_artifacts/babel_1677767029043/work
backcall @ file:///home/conda/feedstock_root/build_artifacts/backcall_1592338393461/work
backports.functools-lru-cache @ file:///home/conda/feedstock_root/build_artifacts/backports.functools_lru_cache_1618230623929/work
bambi @ file:///home/conda/feedstock_root/build_artifacts/bambi_1676036743639/work
beautifulsoup4 @ file:///home/conda/feedstock_root/build_artifacts/beautifulsoup4_1680888073205/work
bleach @ file:///home/conda/feedstock_root/build_artifacts/bleach_1674535352125/work
branca @ file:///home/conda/feedstock_root/build_artifacts/branca_1667848736831/work
brotlipy @ file:///Users/runner/miniforge3/conda-bld/brotlipy_1666764877873/work
cached-property @ file:///home/conda/feedstock_root/build_artifacts/cached_property_1615209429212/work
cachetools @ file:///home/conda/feedstock_root/build_artifacts/cachetools_1674482203741/work
certifi==2022.12.7
cffi @ file:///Users/runner/miniforge3/conda-bld/cffi_1671179612308/work
charset-normalizer @ file:///home/conda/feedstock_root/build_artifacts/charset-normalizer_1678108872112/work
click==8.1.3
click-default-group-wheel @ file:///home/conda/feedstock_root/build_artifacts/click-default-group-wheel_1651678304610/work
click-plugins==1.1.1
cligj @ file:///home/conda/feedstock_root/build_artifacts/cligj_1633637764473/work
cloudpickle @ file:///home/conda/feedstock_root/build_artifacts/cloudpickle_1674202310934/work
colorama @ file:///home/conda/feedstock_root/build_artifacts/colorama_1666700638685/work
comm @ file:///home/conda/feedstock_root/build_artifacts/comm_1679481329611/work
cons @ file:///home/conda/feedstock_root/build_artifacts/cons_1642650890595/work
contourpy @ file:///Users/runner/miniforge3/conda-bld/contourpy_1673633760739/work
cryptography @ file:///Users/runner/miniforge3/conda-bld/cryptography-split_1681508729496/work
cycler @ file:///home/conda/feedstock_root/build_artifacts/cycler_1635519461629/work
datasette @ file:///home/conda/feedstock_root/build_artifacts/datasette_1678557155408/work
datasette-geojson==0.4.0
datasette-geojson-map==0.4.0
datasette-leaflet==0.2.2
datasette-leaflet-geojson==0.8
dbfread==2.0.7
debugpy @ file:///Users/runner/miniforge3/conda-bld/debugpy_1680755705686/work
decorator @ file:///home/conda/feedstock_root/build_artifacts/decorator_1641555617451/work
defusedxml @ file:///home/conda/feedstock_root/build_artifacts/defusedxml_1615232257335/work
entrypoints @ file:///home/conda/feedstock_root/build_artifacts/entrypoints_1643888246732/work
et-xmlfile @ file:///home/conda/feedstock_root/build_artifacts/et_xmlfile_1674664118162/work
etuples @ file:///home/conda/feedstock_root/build_artifacts/etuples_1662525407359/work
executing @ file:///home/conda/feedstock_root/build_artifacts/executing_1667317341051/work
fastjsonschema @ file:///home/conda/feedstock_root/build_artifacts/python-fastjsonschema_1677336799617/work/dist
fastprogress @ file:///home/conda/feedstock_root/build_artifacts/fastprogress_1658690818839/work
filelock @ file:///home/conda/feedstock_root/build_artifacts/filelock_1680834529360/work
Fiona @ file:///Users/runner/miniforge3/conda-bld/fiona_1676029649166/work
flit_core @ file:///home/conda/feedstock_root/build_artifacts/flit-core_1667734568827/work/source/flit_core
folium @ file:///home/conda/feedstock_root/build_artifacts/folium_1670956290671/work
fonttools @ file:///Users/runner/miniforge3/conda-bld/fonttools_1680021481169/work
formulae @ file:///home/conda/feedstock_root/build_artifacts/formulae_1652968848219/work
GDAL @ file:///Users/runner/miniforge3/conda-bld/gdal-split_1678653784244/work/build/swig/python
geojson==3.0.1
geopandas @ file:///home/conda/feedstock_root/build_artifacts/geopandas_1670698600430/work
googlemaps==4.10.0
graphviz @ file:///home/conda/feedstock_root/build_artifacts/python-graphviz_1658658635601/work
h11 @ file:///home/conda/feedstock_root/build_artifacts/h11_1664132893548/work
h2 @ file:///home/conda/feedstock_root/build_artifacts/h2_1634280454336/work
h5netcdf @ file:///home/conda/feedstock_root/build_artifacts/h5netcdf_1677670132771/work
h5py @ file:///Users/runner/miniforge3/conda-bld/h5py_1674499139319/work
hpack==4.0.0
htmlmin==0.1.12
httpcore @ file:///home/conda/feedstock_root/build_artifacts/httpcore_1678983290651/work
httpx @ file:///home/conda/feedstock_root/build_artifacts/httpx_1681225508856/work
hupper @ file:///home/conda/feedstock_root/build_artifacts/hupper_1681136650560/work
hyperframe @ file:///home/conda/feedstock_root/build_artifacts/hyperframe_1619110129307/work
idna @ file:///home/conda/feedstock_root/build_artifacts/idna_1663625384323/work
ImageHash @ file:///home/conda/feedstock_root/build_artifacts/imagehash_1664371213222/work
importlib-metadata @ file:///home/conda/feedstock_root/build_artifacts/importlib-metadata_1681581693083/work
importlib-resources @ file:///home/conda/feedstock_root/build_artifacts/importlib_resources_1676919000169/work
ipykernel @ file:///Users/runner/miniforge3/conda-bld/ipykernel_1679336661730/work
ipython @ file:///Users/runner/miniforge3/conda-bld/ipython_1680185563420/work
ipython-genutils==0.2.0
ipywidgets==8.0.6
itsdangerous @ file:///home/conda/feedstock_root/build_artifacts/itsdangerous_1648147185463/work
janus @ file:///home/conda/feedstock_root/build_artifacts/janus_1639756780431/work
jedi @ file:///home/conda/feedstock_root/build_artifacts/jedi_1669134318875/work
Jinja2 @ file:///home/conda/feedstock_root/build_artifacts/jinja2_1636510082894/work
joblib @ file:///home/conda/feedstock_root/build_artifacts/joblib_1663332044897/work
json5 @ file:///home/conda/feedstock_root/build_artifacts/json5_1600692310011/work
jsonschema @ file:///home/conda/feedstock_root/build_artifacts/jsonschema-meta_1669810440410/work
jupyter-events @ file:///home/conda/feedstock_root/build_artifacts/jupyter_events_1673559782596/work
jupyter_client @ file:///home/conda/feedstock_root/build_artifacts/jupyter_client_1681432441054/work
jupyter_core @ file:///Users/runner/miniforge3/conda-bld/jupyter_core_1678994456308/work
jupyter_server @ file:///home/conda/feedstock_root/build_artifacts/jupyter_server_1679073341944/work
jupyter_server_terminals @ file:///home/conda/feedstock_root/build_artifacts/jupyter_server_terminals_1673491454549/work
jupyterlab @ file:///home/conda/feedstock_root/build_artifacts/jupyterlab_1674494302491/work
jupyterlab-pygments @ file:///home/conda/feedstock_root/build_artifacts/jupyterlab_pygments_1649936611996/work
jupyterlab-widgets==3.0.7
jupyterlab_server @ file:///home/conda/feedstock_root/build_artifacts/jupyterlab_server_1681424698040/work
kiwisolver @ file:///Users/runner/miniforge3/conda-bld/kiwisolver_1666805734106/work
logical-unification @ file:///home/conda/feedstock_root/build_artifacts/logical-unification_1642642906224/work
mapclassify @ file:///home/conda/feedstock_root/build_artifacts/mapclassify_1673861555770/work
markdown-it-py @ file:///home/conda/feedstock_root/build_artifacts/markdown-it-py_1677100944732/work
MarkupSafe @ file:///Users/runner/miniforge3/conda-bld/markupsafe_1674135909046/work
matplotlib @ file:///Users/runner/miniforge3/conda-bld/matplotlib-suite_1674078913487/work
matplotlib-inline @ file:///home/conda/feedstock_root/build_artifacts/matplotlib-inline_1660814786464/work
mdurl @ file:///home/conda/feedstock_root/build_artifacts/mdurl_1639515908913/work
mergedeep @ file:///home/conda/feedstock_root/build_artifacts/mergedeep_1612711302171/work
miniKanren @ file:///home/conda/feedstock_root/build_artifacts/minikanren_1642650904995/work
mistune @ file:///home/conda/feedstock_root/build_artifacts/mistune_1675771498296/work
mkl-service==2.4.0
multimethod @ file:///home/conda/feedstock_root/build_artifacts/multimethod_1603129052241/work
multipledispatch==0.6.0
munch==2.5.0
munkres==1.1.4
nbclassic @ file:///home/conda/feedstock_root/build_artifacts/nbclassic_1680699273776/work
nbclient @ file:///home/conda/feedstock_root/build_artifacts/nbclient_1680676954923/work
nbconvert @ file:///home/conda/feedstock_root/build_artifacts/nbconvert-meta_1681137024412/work
nbformat @ file:///home/conda/feedstock_root/build_artifacts/nbformat_1679336765223/work
nest-asyncio @ file:///home/conda/feedstock_root/build_artifacts/nest-asyncio_1664684991461/work
networkx @ file:///home/conda/feedstock_root/build_artifacts/networkx_1680692919326/work
notebook @ file:///home/conda/feedstock_root/build_artifacts/notebook_1680870634737/work
notebook_shim @ file:///home/conda/feedstock_root/build_artifacts/notebook-shim_1667478401171/work
numpy @ file:///Users/runner/miniforge3/conda-bld/numpy_1668919173641/work
openpyxl==3.1.1
packaging @ file:///home/conda/feedstock_root/build_artifacts/packaging_1681337016113/work
pandas==1.5.3
pandocfilters @ file:///home/conda/feedstock_root/build_artifacts/pandocfilters_1631603243851/work
parso @ file:///home/conda/feedstock_root/build_artifacts/parso_1638334955874/work
patsy @ file:///home/conda/feedstock_root/build_artifacts/patsy_1665356157073/work
pexpect @ file:///home/conda/feedstock_root/build_artifacts/pexpect_1667297516076/work
phik @ file:///Users/runner/miniforge3/conda-bld/phik_1670564288257/work
pickleshare @ file:///home/conda/feedstock_root/build_artifacts/pickleshare_1602536217715/work
Pillow @ file:///Users/runner/miniforge3/conda-bld/pillow_1675487295968/work
Pint @ file:///home/conda/feedstock_root/build_artifacts/pint_1666886773853/work
pkgutil_resolve_name @ file:///home/conda/feedstock_root/build_artifacts/pkgutil-resolve-name_1633981968097/work
platformdirs @ file:///home/conda/feedstock_root/build_artifacts/platformdirs_1679871349196/work
pluggy @ file:///home/conda/feedstock_root/build_artifacts/pluggy_1667232663820/work
pooch @ file:///home/conda/feedstock_root/build_artifacts/pooch_1679580333621/work
prometheus-client @ file:///home/conda/feedstock_root/build_artifacts/prometheus_client_1674535637125/work
prompt-toolkit @ file:///home/conda/feedstock_root/build_artifacts/prompt-toolkit_1677600924538/work
psutil @ file:///Users/runner/miniforge3/conda-bld/psutil_1667886080626/work
ptyprocess @ file:///home/conda/feedstock_root/build_artifacts/ptyprocess_1609419310487/work/dist/ptyprocess-0.7.0-py2.py3-none-any.whl
pure-eval @ file:///home/conda/feedstock_root/build_artifacts/pure_eval_1642875951954/work
pycparser @ file:///home/conda/feedstock_root/build_artifacts/pycparser_1636257122734/work
pydantic @ file:///Users/runner/miniforge3/conda-bld/pydantic_1679565473852/work
Pygments @ file:///home/conda/feedstock_root/build_artifacts/pygments_1681142969746/work
pymc @ file:///home/conda/feedstock_root/build_artifacts/pymc-suite_1674187812073/work
pyOpenSSL @ file:///home/conda/feedstock_root/build_artifacts/pyopenssl_1680037383858/work
pyparsing @ file:///home/conda/feedstock_root/build_artifacts/pyparsing_1652235407899/work
pyproj @ file:///Users/runner/miniforge3/conda-bld/pyproj_1680037896354/work
pyrsistent @ file:///Users/runner/miniforge3/conda-bld/pyrsistent_1672681602414/work
PySocks @ file:///home/conda/feedstock_root/build_artifacts/pysocks_1661604839144/work
pytensor @ file:///Users/runner/miniforge3/conda-bld/pytensor-suite_1673472851429/work
python-baseconv @ file:///home/conda/feedstock_root/build_artifacts/python-baseconv_1618943307433/work
python-dateutil @ file:///home/conda/feedstock_root/build_artifacts/python-dateutil_1626286286081/work
python-json-logger @ file:///home/conda/feedstock_root/build_artifacts/python-json-logger_1677079630776/work
python-multipart @ file:///home/conda/feedstock_root/build_artifacts/python-multipart_1679167423335/work
pytz @ file:///home/conda/feedstock_root/build_artifacts/pytz_1680088766131/work
PyWavelets @ file:///Users/runner/miniforge3/conda-bld/pywavelets_1673082416279/work
PyYAML @ file:///Users/runner/miniforge3/conda-bld/pyyaml_1666772577178/work
pyzmq @ file:///Users/runner/miniforge3/conda-bld/pyzmq_1679317066627/work
requests @ file:///home/conda/feedstock_root/build_artifacts/requests_1680286922386/work
rfc3339-validator @ file:///home/conda/feedstock_root/build_artifacts/rfc3339-validator_1638811747357/work
rfc3986 @ file:///home/conda/feedstock_root/build_artifacts/rfc3986_1641825045899/work
rfc3986-validator @ file:///home/conda/feedstock_root/build_artifacts/rfc3986-validator_1598024191506/work
rich @ file:///home/conda/feedstock_root/build_artifacts/rich-split_1681324574936/work/dist
Rtree @ file:///Users/runner/miniforge3/conda-bld/rtree_1666813511551/work
scikit-learn @ file:///Users/runner/miniforge3/conda-bld/scikit-learn_1679676062989/work
scipy==1.9.3
seaborn @ file:///home/conda/feedstock_root/build_artifacts/seaborn-split_1672497695270/work
Send2Trash @ file:///home/conda/feedstock_root/build_artifacts/send2trash_1628511208346/work
shapefile-to-sqlite==0.4.2
shapely @ file:///Users/runner/miniforge3/conda-bld/shapely_1675079762562/work
six @ file:///home/conda/feedstock_root/build_artifacts/six_1620240208055/work
sniffio @ file:///home/conda/feedstock_root/build_artifacts/sniffio_1662051266223/work
soupsieve @ file:///home/conda/feedstock_root/build_artifacts/soupsieve_1658207591808/work
sqlite-fts4==1.0.3
sqlite-utils==3.30
stack-data @ file:///home/conda/feedstock_root/build_artifacts/stack_data_1669632077133/work
statsmodels @ file:///Users/runner/miniforge3/conda-bld/statsmodels_1667586056539/work
tabulate==0.9.0
tangled-up-in-unicode @ file:///home/conda/feedstock_root/build_artifacts/tangled-up-in-unicode_1632832610704/work
terminado @ file:///Users/runner/miniforge3/conda-bld/terminado_1670254106711/work
threadpoolctl @ file:///home/conda/feedstock_root/build_artifacts/threadpoolctl_1643647933166/work
tinycss2 @ file:///home/conda/feedstock_root/build_artifacts/tinycss2_1666100256010/work
tomli @ file:///home/conda/feedstock_root/build_artifacts/tomli_1644342247877/work
toolz @ file:///home/conda/feedstock_root/build_artifacts/toolz_1657485559105/work
tornado @ file:///Users/runner/miniforge3/conda-bld/tornado_1666788897868/work
tqdm @ file:///home/conda/feedstock_root/build_artifacts/tqdm_1662214488106/work
traitlets @ file:///home/conda/feedstock_root/build_artifacts/traitlets_1675110562325/work
typeguard @ file:///home/conda/feedstock_root/build_artifacts/typeguard_1658932097418/work
typing_extensions @ file:///home/conda/feedstock_root/build_artifacts/typing_extensions_1678559861143/work
tzdata @ file:///home/conda/feedstock_root/build_artifacts/python-tzdata_1680081134351/work
urllib3 @ file:///home/conda/feedstock_root/build_artifacts/urllib3_1678635778344/work
uvicorn @ file:///Users/runner/miniforge3/conda-bld/uvicorn-split_1678984951342/work
visions @ file:///home/conda/feedstock_root/build_artifacts/visions_1638743854326/work
wcwidth @ file:///home/conda/feedstock_root/build_artifacts/wcwidth_1673864653149/work
webencodings==0.5.1
websocket-client @ file:///home/conda/feedstock_root/build_artifacts/websocket-client_1675567828044/work
widgetsnbextension==4.0.7
xarray @ file:///home/conda/feedstock_root/build_artifacts/xarray_1675801625528/work
xarray-einstats @ file:///home/conda/feedstock_root/build_artifacts/xarray-einstats_1674259665168/work
xyzservices @ file:///home/conda/feedstock_root/build_artifacts/xyzservices_1676835466992/work
ydata-profiling @ file:///private/var/folders/sy/f16zz6x50xz3113nwtb9bvq00000gp/T/abs_4ekyqsefsv/croot/ydata-profiling_1680555823852/work
zipp @ file:///home/conda/feedstock_root/build_artifacts/zipp_1677313463193/work


### OS

Mac

### Checklist

- [X] There is not yet another bug report for this issue in the [issue tracker](https://github.com/ydataai/pandas-profiling/issues)
- [X] The problem is reproducible from this bug report. [This guide](http://matthewrocklin.com/blog/work/2018/02/28/minimal-bug-reports) can help to craft a minimal bug report.
- [X] The issue has not been resolved by the entries listed under [Common Issues](https://pandas-profiling.ydata.ai/docs/master/pages/support_contrib/common_issues.html).
alexbarros commented 5 months ago

closed based on https://github.com/ydataai/ydata-profiling/pull/1568