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ydataai / ydata-profiling

1 Line of code data quality profiling & exploratory data analysis for Pandas and Spark DataFrames.
https://docs.profiling.ydata.ai
MIT License
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AttributeError: 'ProfileReport' object has no attribute 'file' #206

Closed Zylatis closed 5 years ago

Zylatis commented 5 years ago

Describe the bug Simply calling this on a csv (which itself was once upon a time outputted from pandas) using the command line:

pandas_profiling processed_data/temp_result_job_data.csv profile1.html

Version information: Using python3.6 with pip freeze output below: absl-py==0.7.1 apparmor==2.10.95 apparmor.click==0.3.13.1 APScheduler==3.6.0 apturl==0.5.2 asn1crypto==0.24.0 astor==0.7.1 attrs==19.1.0 Automat==0.7.0 autopilot==1.5.0 backcall==0.1.0 beautifulsoup4==4.4.1 bleach==3.1.0 blinker==1.3 bokeh==1.2.0 boto3==1.9.126 botocore==1.12.126 Brlapi==0.6.4 certifi==2019.3.9 cffi==1.12.2 chardet==3.0.4 checkbox-support==0.22 chrome-gnome-shell==0.0.0 Click==7.0 cloudpickle==0.6.1 colorama==0.4.1 colorclass==2.2.0 coloredlogs==10.0 colorhash==1.0.2 command-not-found==0.3 ConfigArgParse==0.13.0 constantly==15.1.0 cryptography==2.6.1 cycler==0.10.0 Cython==0.23.4 dask==2.0.0 decorator==4.4.0 defer==1.0.6 defusedxml==0.6.0 dell-recovery==0.0.0 deprecation==2.0.6 descartes==1.1.0 distributed==2.0.1 docopt==0.6.2 docutils==0.14 entrypoints==0.3 evdev==0.4.7 extras==0.0.3 Faker==1.0.7 fakeredis==0.10.3 fbmessenger==5.4.0 feedparser==5.1.3 fixtures==1.3.1 Flask==1.0.2 Flask-Cors==3.0.7 Flask-JWT-Simple==0.0.3 future==0.16.0 fuzzyset==0.0.19 fuzzywuzzy==0.17.0 gast==0.2.2 geographiclib==1.49 geopy==1.20.0 gevent==1.4.0 greenlet==0.4.15 grpcio==1.19.0 guacamole==0.9.2 h2o==3.24.0.4 h5py==2.9.0 HeapDict==1.0.0 httplib2==0.9.1 humanfriendly==4.18 hyperlink==18.0.0 idna==2.8 incremental==17.5.0 ipykernel==5.1.1 ipython==7.5.0 ipython-genutils==0.2.0 ipywidgets==7.4.2 itsdangerous==1.1.0 jedi==0.13.3 Jinja2==2.10 jmespath==0.9.4 joblib==0.13.2 jsonpickle==1.1 jsonschema==2.6.0 junitxml==0.6 jupyter==1.0.0 jupyter-client==5.2.4 jupyter-console==6.0.0 jupyter-core==4.4.0 jupytext==1.1.3 Keras==2.2.4 Keras-Applications==1.0.7 Keras-Preprocessing==1.0.9 kiwisolver==1.0.1 klein==17.10.0 language-selector==0.1 LibAppArmor==2.10.95 lightgbm==2.2.3 linecache2==1.0.0 llvmlite==0.29.0 locket==0.2.0 louis==2.6.4 lxml==4.3.3 Mako==1.0.3 Markdown==3.1 MarkupSafe==1.1.1 matplotlib==3.0.3 mattermostwrapper==2.1 mistune==0.8.4 mizani==0.5.4 mock==2.0.0 mpld3==0.3 mysql==0.0.2 mysql-connector-python-rf==2.2.2 mysqlclient==1.4.2.post1 nbconvert==5.5.0 nbformat==4.4.0 networkx==2.2 nltk==3.4 notebook==5.7.8 num2words==0.5.10 numba==0.44.1 numpy==1.15.4 oauthlib==1.0.3 onboard==1.2.0 openshot-qt==2.4.4 packaging==18.0 padme==1.1.1 palettable==3.1.1 pandas==0.24.2 pandocfilters==1.4.2 parso==0.4.0 partd==1.0.0 pathlib==1.0.1 patsy==0.5.1 pbr==5.1.3 pexpect==4.0.1 pickleshare==0.7.5 pika==0.12.0 Pillow==6.0.0 plainbox==0.25 plotnine==0.5.1 progressbar==2.3 prometheus-client==0.6.0 prompt-toolkit==2.0.9 protobuf==3.7.1 psutil==3.4.2 psycopg2==2.8.2 ptyprocess==0.5 pyaml==17.12.1 pyasn1==0.1.9 pycparser==2.19 pycups==1.9.73 pycurl==7.43.0 pydot==1.4.1 Pygments==2.4.0 pygobject==3.20.0 PyHamcrest==1.9.0 PyJWT==1.7.1 pykwalify==1.7.0 pymongo==3.7.2 PyOpenGL==3.0.2 pyparsing==2.3.1 PySocks==1.6.8 python-apt==1.1.0b1+ubuntu0.16.4.2 python-dateutil==2.8.0 python-debian==0.1.27 python-engineio==3.5.0 python-Levenshtein==0.12.0 python-mimeparse==0.1.4 python-socketio==3.1.2 python-subunit==1.1.0 python-systemd==231 python-telegram-bot==11.1.0 python-xlib==0.14 pytz==2018.9 pyxdg==0.25 PyYAML==5.1 pyzmq==18.0.1 qtconsole==4.4.4 questionary==1.0.2 rasa-core==0.13.7 rasa-core-sdk==0.13.0 rasa-nlu==0.14.6 redis==2.10.6 reportlab==3.3.0 requests==2.21.0 requests-toolbelt==0.9.1 rocketchat-API==0.6.27 ruamel.yaml==0.15.89 s3transfer==0.2.0 schedule==0.6.0 scikit-learn==0.21.1 scipy==1.3.0 seaborn==0.9.0 semantic-version==2.6.0 Send2Trash==1.5.0 sessioninstaller==0.0.0 simplejson==3.16.0 singledispatch==3.4.0.3 six==1.12.0 slackclient==1.3.1 snips-nlu==0.19.6 snips-nlu-en==0.2.1 snips-nlu-parsers==0.2.1 snips-nlu-utils==0.8.0 sortedcontainers==2.1.0 statsmodels==0.9.0 swifter==0.289 system-service==0.3 tblib==1.4.0 tensorboard==1.12.2 tensorflow==1.12.0 tensorflow-estimator==1.13.0 termcolor==1.1.0 terminado==0.8.2 terminaltables==3.1.0 testfixtures==6.8.2 testpath==0.4.2 testscenarios==0.4 testtools==1.8.1 text-unidecode==1.2 texttable==1.6.1 tornado==4.5.3 tqdm==4.31.1 traceback2==1.4.0 traitlets==4.3.2 twilio==6.26.0 Twisted==18.9.0 typing==3.6.6 tzlocal==1.5.1 ubuntu-drivers-common==0.0.0 ufw==0.35 unattended-upgrades==0.1 unittest2==1.1.0 unity-scope-calculator==0.1 unity-scope-chromiumbookmarks==0.1 unity-scope-colourlovers==0.1 unity-scope-devhelp==0.1 unity-scope-firefoxbookmarks==0.1 unity-scope-gdrive==0.7 unity-scope-manpages==0.1 unity-scope-openclipart==0.1 unity-scope-texdoc==0.1 unity-scope-tomboy==0.1 unity-scope-virtualbox==0.1 unity-scope-yelp==0.1 unity-scope-zotero==0.1 uoa-integration-tests==0.2 urllib3==1.24.1 usb-creator==0.3.0 vboxapi==1.0 vidcutter==6.0.0 virtualenv==15.0.1 wcwidth==0.1.7 webencodings==0.5.1 webexteamssdk==1.1.1 websocket-client==0.54.0 Werkzeug==0.15.1 widgetsnbextension==3.4.2 xdiagnose==3.8.4.1 xgboost==0.90 xkit==0.0.0 xlrd==1.0.0 XlsxWriter==0.7.3 zict==1.0.0 zope.interface==4.6.0

sbrugman commented 5 years ago

Great catch. The tests did not find this line.

The bug is in opening the report, if I am correct. This means that the report should still be generated and that with the --silent argument the error does not occur (untested).

Will be fixed soon.

On Tue, Jul 9, 2019, 03:48 Graeme Gossel notifications@github.com wrote:

Describe the bug Simply calling this on a csv (which itself was once upon a time outputted from pandas) using the command line:

pandas_profiling processed_data/temp_result_job_data.csv profile1.html

Version information: absl-py==0.7.1 apparmor==2.10.95 apparmor.click==0.3.13.1 APScheduler==3.6.0 apturl==0.5.2 asn1crypto==0.24.0 astor==0.7.1 attrs==19.1.0 Automat==0.7.0 autopilot==1.5.0 backcall==0.1.0 beautifulsoup4==4.4.1 bleach==3.1.0 blinker==1.3 bokeh==1.2.0 boto3==1.9.126 botocore==1.12.126 Brlapi==0.6.4 certifi==2019.3.9 cffi==1.12.2 chardet==3.0.4 checkbox-support==0.22 chrome-gnome-shell==0.0.0 Click==7.0 cloudpickle==0.6.1 colorama==0.4.1 colorclass==2.2.0 coloredlogs==10.0 colorhash==1.0.2 command-not-found==0.3 ConfigArgParse==0.13.0 constantly==15.1.0 cryptography==2.6.1 cycler==0.10.0 Cython==0.23.4 dask==2.0.0 decorator==4.4.0 defer==1.0.6 defusedxml==0.6.0 dell-recovery==0.0.0 deprecation==2.0.6 descartes==1.1.0 distributed==2.0.1 docopt==0.6.2 docutils==0.14 entrypoints==0.3 evdev==0.4.7 extras==0.0.3 Faker==1.0.7 fakeredis==0.10.3 fbmessenger==5.4.0 feedparser==5.1.3 fixtures==1.3.1 Flask==1.0.2 Flask-Cors==3.0.7 Flask-JWT-Simple==0.0.3 future==0.16.0 fuzzyset==0.0.19 fuzzywuzzy==0.17.0 gast==0.2.2 geographiclib==1.49 geopy==1.20.0 gevent==1.4.0 greenlet==0.4.15 grpcio==1.19.0 guacamole==0.9.2 h2o==3.24.0.4 h5py==2.9.0 HeapDict==1.0.0 httplib2==0.9.1 humanfriendly==4.18 hyperlink==18.0.0 idna==2.8 incremental==17.5.0 ipykernel==5.1.1 ipython==7.5.0 ipython-genutils==0.2.0 ipywidgets==7.4.2 itsdangerous==1.1.0 jedi==0.13.3 Jinja2==2.10 jmespath==0.9.4 joblib==0.13.2 jsonpickle==1.1 jsonschema==2.6.0 junitxml==0.6 jupyter==1.0.0 jupyter-client==5.2.4 jupyter-console==6.0.0 jupyter-core==4.4.0 jupytext==1.1.3 Keras==2.2.4 Keras-Applications==1.0.7 Keras-Preprocessing==1.0.9 kiwisolver==1.0.1 klein==17.10.0 language-selector==0.1 LibAppArmor==2.10.95 lightgbm==2.2.3 linecache2==1.0.0 llvmlite==0.29.0 locket==0.2.0 louis==2.6.4 lxml==4.3.3 Mako==1.0.3 Markdown==3.1 MarkupSafe==1.1.1 matplotlib==3.0.3 mattermostwrapper==2.1 mistune==0.8.4 mizani==0.5.4 mock==2.0.0 mpld3==0.3 mysql==0.0.2 mysql-connector-python-rf==2.2.2 mysqlclient==1.4.2.post1 nbconvert==5.5.0 nbformat==4.4.0 networkx==2.2 nltk==3.4 notebook==5.7.8 num2words==0.5.10 numba==0.44.1 numpy==1.15.4 oauthlib==1.0.3 onboard==1.2.0 openshot-qt==2.4.4 packaging==18.0 padme==1.1.1 palettable==3.1.1 pandas==0.24.2 pandocfilters==1.4.2 parso==0.4.0 partd==1.0.0 pathlib==1.0.1 patsy==0.5.1 pbr==5.1.3 pexpect==4.0.1 pickleshare==0.7.5 pika==0.12.0 Pillow==6.0.0 plainbox==0.25 plotnine==0.5.1 progressbar==2.3 prometheus-client==0.6.0 prompt-toolkit==2.0.9 protobuf==3.7.1 psutil==3.4.2 psycopg2==2.8.2 ptyprocess==0.5 pyaml==17.12.1 pyasn1==0.1.9 pycparser==2.19 pycups==1.9.73 pycurl==7.43.0 pydot==1.4.1 Pygments==2.4.0 pygobject==3.20.0 PyHamcrest==1.9.0 PyJWT==1.7.1 pykwalify==1.7.0 pymongo==3.7.2 PyOpenGL==3.0.2 pyparsing==2.3.1 PySocks==1.6.8 python-apt==1.1.0b1+ubuntu0.16.4.2 python-dateutil==2.8.0 python-debian==0.1.27 python-engineio==3.5.0 python-Levenshtein==0.12.0 python-mimeparse==0.1.4 python-socketio==3.1.2 python-subunit==1.1.0 python-systemd==231 python-telegram-bot==11.1.0 python-xlib==0.14 pytz==2018.9 pyxdg==0.25 PyYAML==5.1 pyzmq==18.0.1 qtconsole==4.4.4 questionary==1.0.2 rasa-core==0.13.7 rasa-core-sdk==0.13.0 rasa-nlu==0.14.6 redis==2.10.6 reportlab==3.3.0 requests==2.21.0 requests-toolbelt==0.9.1 rocketchat-API==0.6.27 ruamel.yaml==0.15.89 s3transfer==0.2.0 schedule==0.6.0 scikit-learn==0.21.1 scipy==1.3.0 seaborn==0.9.0 semantic-version==2.6.0 Send2Trash==1.5.0 sessioninstaller==0.0.0 simplejson==3.16.0 singledispatch==3.4.0.3 six==1.12.0 slackclient==1.3.1 snips-nlu==0.19.6 snips-nlu-en==0.2.1 snips-nlu-parsers==0.2.1 snips-nlu-utils==0.8.0 sortedcontainers==2.1.0 statsmodels==0.9.0 swifter==0.289 system-service==0.3 tblib==1.4.0 tensorboard==1.12.2 tensorflow==1.12.0 tensorflow-estimator==1.13.0 termcolor==1.1.0 terminado==0.8.2 terminaltables==3.1.0 testfixtures==6.8.2 testpath==0.4.2 testscenarios==0.4 testtools==1.8.1 text-unidecode==1.2 texttable==1.6.1 tornado==4.5.3 tqdm==4.31.1 traceback2==1.4.0 traitlets==4.3.2 twilio==6.26.0 Twisted==18.9.0 typing==3.6.6 tzlocal==1.5.1 ubuntu-drivers-common==0.0.0 ufw==0.35 unattended-upgrades==0.1 unittest2==1.1.0 unity-scope-calculator==0.1 unity-scope-chromiumbookmarks==0.1 unity-scope-colourlovers==0.1 unity-scope-devhelp==0.1 unity-scope-firefoxbookmarks==0.1 unity-scope-gdrive==0.7 unity-scope-manpages==0.1 unity-scope-openclipart==0.1 unity-scope-texdoc==0.1 unity-scope-tomboy==0.1 unity-scope-virtualbox==0.1 unity-scope-yelp==0.1 unity-scope-zotero==0.1 uoa-integration-tests==0.2 urllib3==1.24.1 usb-creator==0.3.0 vboxapi==1.0 vidcutter==6.0.0 virtualenv==15.0.1 wcwidth==0.1.7 webencodings==0.5.1 webexteamssdk==1.1.1 websocket-client==0.54.0 Werkzeug==0.15.1 widgetsnbextension==3.4.2 xdiagnose==3.8.4.1 xgboost==0.90 xkit==0.0.0 xlrd==1.0.0 XlsxWriter==0.7.3 zict==1.0.0 zope.interface==4.6.0

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Zylatis commented 5 years ago

Scathing indictment of my own investigation skills I didn't even think to check the output html, thanks!