search

yeatmanlab / AFQ-Browser

Browser-based visualization tools for AFQ results
BSD 3-Clause "New" or "Revised" License
33 stars 15 forks source link

Using afq_streamlines with tract key-names, instead of data_partial #183

Closed arokem closed 6 years ago

arokem commented 6 years ago

... that had integer keys.

Towards using tract names as keys, instead of integers.

richford commented 6 years ago

LGTM.

richford commented 6 years ago

Also #185 goes a long way to using tract names as keys instead of integers as well. The only remaining integer keys are in 3d-brain.js. So whichever one gets merged first, we should check the other one to make sure it plays nicely.

arokem commented 6 years ago

Rebased on master. It works on my end!

I will keep going here, to add the AFQ ultra-tubes, so please don't merge yet.

arokem commented 6 years ago

OK: added coreFiber in each tract (which is the median of all the XYZ coordinates in each tract), and duplicated into a streamlines.json file from which the browser will read. Once we have that working, this file will get generated from the TRACULA data upon assembling from that.

richford commented 6 years ago

LGTM