[FIX] Update fetch.py with pediatric ARC ROI mapping

yeatmanlab / pyAFQ

Automated Fiber Quantification ... in Python

http://yeatmanlab.github.io/pyAFQ/

BSD 2-Clause "Simplified" License

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Closed chiuhoward closed 4 months ago

chiuhoward commented 4 months ago

Current mapping is: ARC include0 = SLF include0 ARC include1 = SLF exclude0 ARC include2 = SLF include1

This results in premature clipping of the ARC as ARC include2 is between ARC include0 and ARC include1.

Swapping the mapping ensures that ARC is clipped correctly by redefining the ROIs mapped from the SLF.

Before

After

chiuhoward commented 4 months ago

New mapping would therefore be:

ARC include0 = SLF include0
ARC include1 = SLF include1 ARC include2 = SLF exclude0

36000 commented 4 months ago

LGTM!