Allow input tractography from other derivative pipelines

yeatmanlab / pyAFQ

Automated Fiber Quantification ... in Python

http://yeatmanlab.github.io/pyAFQ/

BSD 2-Clause "Simplified" License

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Allow input tractography from other derivative pipelines #336

Closed arokem closed 3 years ago

arokem commented 3 years ago

Right now, if you want pyAFQ to pick up tractography that was generated through another pipeline, you would have to copy it into the folder for each subject in the right time. It would be good if the API allowed us to specify the name of a pipeline (like we currently have dmriprep and segmentation) to pick up tractography products.

richford commented 3 years ago

This is potentially a good candidate for the 2020 code sprint since it is on the critical path to our previously discussed tractography comparison project. Either way, I'd be interested in working on this to move that project forward.

36000 commented 3 years ago

Resolved by #422