yerkes-gencore / scRNAseq_template

Template for ENPRC Genomics Core single cell RNAseq projects
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Representation of numbers of cells in subsets #2

Closed gktharp1 closed 11 months ago

gktharp1 commented 1 year ago

Currently using an embedded table with cell counts. In addition to cell counts, it would be useful to have proportion/percent per capture to compare across captures. Micah suggested a stacked bar chart which is a good visual representation of both: counts where total height of bar is total cells per capture proportion where bar is 100% divided by subsets. Also, tables of each kind of values are useful and maybe necessary for publication versions of this data. Would be nice if standard/template code supported optional table or saving table to file for publication.

derrik-gratz commented 11 months ago

47dbffba89e5a629487c799b56e93d6a1d00bddc