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yfukasawa / LongQC

LongQC is a tool for the data quality control of the PacBio and ONT long reads.
MIT License
143 stars 16 forks source link

Docker installation failure #55

Open ap1438 opened 1 year ago

ap1438 commented 1 year ago

I installed it using Docker

But got this error

Traceback (most recent call last): File "/root/LongQC/longQC.py", line 39, in from lq_coverage import LqCoverage File "/root/LongQC/lq_coverage.py", line 11, in from scipy.signal import argrelmax File "/opt/conda/lib/python3.9/site-packages/scipy/signal/init.py", line 309, in from . import _sigtools, windows File "/opt/conda/lib/python3.9/site-packages/scipy/signal/windows/init.py", line 41, in from ._windows import File "/opt/conda/lib/python3.9/site-packages/scipy/signal/windows/_windows.py", line 7, in from scipy import linalg, special, fft as sp_fft File "/opt/conda/lib/python3.9/site-packages/scipy/fft/init.py", line 91, in from ._helper import next_fast_len File "/opt/conda/lib/python3.9/site-packages/scipy/fft/_helper.py", line 3, in from ._pocketfft import helper as _helper File "/opt/conda/lib/python3.9/site-packages/scipy/fft/_pocketfft/init.py", line 3, in from .basic import File "/opt/conda/lib/python3.9/site-packages/scipy/fft/_pocketfft/basic.py", line 6, in from . import pypocketfft as pfft ImportError: /opt/conda/lib/python3.9/site-packages/pandas/_libs/window/../../../../../libstdc++.so.6: version `GLIBCXX_3.4.30' not found (required by /opt/conda/lib/python3.9/site-packages/scipy/fft/_pocketfft/pypocketfft.cpython-39-x86_64-linux-gnu.so)