Some requirements are not installed when using `pip install graphdot`

yhtang / GraphDot

GPU-accelerated Marginalized Graph Kernel with customizable node and edge features; Gaussian process regression.

https://graphdot.readthedocs.io

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Some requirements are not installed when using `pip install graphdot` #3

Closed jdagdelen closed 4 years ago

jdagdelen commented 4 years ago

I'm working on running graphdot in a Google Colab notebook. sing pip install graphdot does not install some of the required libraries that are called when running the example provided in the docs. These are:

treelib
rdkit (not pip-installable)

An example Colab with a working installation can be found here: https://colab.research.google.com/drive/1jNMRkUIbxzIJBqpaWgD-DTh4uuQE28Kb?usp=sharing

yhtang commented 4 years ago

Hi John,

Thanks for the feedback! I do not have permission to access the google drive file though. Could you please give me access?

Yu-Hang

yhtang commented 4 years ago

Fixed upstream.