yhygao / CBIM-Medical-Image-Segmentation

A PyTorch framework for medical image segmentation
Apache License 2.0
260 stars 46 forks source link

About dataset_conversion file #22

Closed haideralimughal closed 1 year ago

haideralimughal commented 1 year ago

Would you please upload a 2D dataset_conversion file of AMOS dataset ?

yhygao commented 1 year ago

Hi,

Thank you for your interest in our work. The AMOS dataset is a high-resolution 3D CT dataset. The difference with 3D models with 2D models would be large. If you want to use 2D models, you can either directly use the 3D dataset_conversion, or refer to the ACDC dataset for a 2D version of dataset_conversion. The only difference between the preprocessing of 2D and 3D is that 2D doesn't need to resample along the z-direction.

haideralimughal commented 1 year ago

Thanks for your valuable reply.