Fix Missing/Outdated Genome in Exitron Calling (Switch to ENSEMBL)

ylab-hi / ScanNeo2

Snakemake-based computational workflow for neoantigen prediction from diverse sources

MIT License

11 stars 1 forks source link

Fix Missing/Outdated Genome in Exitron Calling (Switch to ENSEMBL) #11

Closed riasc closed 7 months ago

riasc commented 7 months ago

In the exitron calling routines (especially when converting the exitron results to vcf) a custom reference has been used. This has been updated to ENSEMBL