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yniknafs / taco

Transcriptome Assemblies Combined into One
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Collapse splice graph #12

Open mkiyer opened 8 years ago

mkiyer commented 8 years ago

Should collapse splice graph at nodes with in_degree == out_degree == 1

Borrow code from assemblyline for this.

mkiyer commented 8 years ago

unclear performance benefit -- need to profile path graphs and determine how many nodes could be collapsed