yocra3 / epimutacions

Package to detect epimutations from DNA methylation data
Other
1 stars 2 forks source link

Task 3b. Add OMIM data #37

Open yocra3 opened 3 years ago

yocra3 commented 3 years ago

Add data from OMIM for epimutations annotated to genes, based on Illumina Annotation.

yocra3 commented 3 years ago

Gene data should be reduced. Each gene should be reported only once and separators should be rethink. If there are no genes, maybe we do not need to print anything.

RaqManzano commented 3 years ago

There is an issue with that, if we try to generate a table per cpg id then it would be complicated to track which genes belong to which cpg as the genes are annotated using the cpg id and not the coordinates.