mitochondrial, chloro, and other plastid genomes

ythuang0522 / homopolish

High-quality Nanopore-only genome polisher

GNU General Public License v3.0

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mitochondrial, chloro, and other plastid genomes #52

Open AntonioBaeza opened 2 years ago

AntonioBaeza commented 2 years ago

I wonder if you are interested in developing sketches for mitochondrial or plastic genomes?

ythuang0522 commented 2 years ago

No. You may consider using local library (-l) by pulling closely-related sequences as you wish. python3 homopolish.py polish -a yourgenome.fasta -l path_to_your_genomes.fasta -m R9.4.pkl -o youroutput

AntonioBaeza commented 2 years ago

thank you, I will give it a try