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ytomofuji
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scLinaX
This is a repository of the scLinaX R package developed in the Tomofuji et al (Quantification of escape from X chromosome inactivation with single-cell omics data reveals heterogeneity across cell types and tissues).
https://ytomofuji.github.io/scLinaX/
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Which parameters shoud I adjust when data is sparser?
#6
Elliott-1
opened
3 days ago
3
should we consider the depth of the OTHER allele to calculate the depth of the REF allele?
#5
massonix
closed
4 weeks ago
2
add documentation on how to run cellsnp-lite and AnnoVar
#4
massonix
opened
1 month ago
7
minor_allele_ratio : How to define the threshold for escapees?
#3
ZixiangPAN
closed
3 months ago
1
How to understand the parameter "Inactive_Gene_ratio_THR"
#2
ZixiangPAN
closed
5 months ago
3
How to identify "Unassigned" Cell?
#1
ZixiangPAN
closed
5 months ago
1