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yueqiw / shiny_cell_browser

Shiny browser for single cell RNAseq data
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Unable to open the Rshiny app with Seurat data #11

Closed falloutac closed 1 year ago

falloutac commented 1 year ago

Dear Developers,

Greetings,

I can't seem to open the app with seurat data, with the following error message:

runApp()

Listening on http://127.0.0.1:6800 2022-10-06 11:21:58 INFO::loading data... Warning in mapvalues(as.integer(assign_clust[, 2]), from = 1:length(colors), : NAs introduced by coercion The following from values were not present in x: 1 2022-10-06 11:22:00 INFO::loaded dataset #1. Warning: Error in eval_tidy: no function to return from, jumping to top level 1: runApp Warning: Error in eval_tidy: no function to return from, jumping to top level 1: runApp Warning: Error in eval_tidy: no function to return from, jumping to top level 1: runApp

The induced NAs may be suppressed by suppressWarnings, yet I was unable to identify the source of the eval_tidy. Required csv & rds files has been properly processed and can be loaded to app on other devices.

Many thanks I am looking forward to hearing from you.

yueqiw commented 1 year ago

Thanks for the question.

Required csv & rds files has been properly processed and can be loaded to app on other devices.

Do you mean the data can be loaded to the same Shiny browser app on other devices, or they can loaded in R but you haven't had success running this app (on all devices)?

I'm also not sure about where eval_tidy is being used. Were you able to identify which line of code caused the error?