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yueqiw / shiny_cell_browser

Shiny browser for single cell RNAseq data
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Docker image requires 'shinythemes' #8

Closed gringer closed 4 years ago

gringer commented 4 years ago

Error message seen:

An error has occurred!

there is no package called ‘shinythemes’

I added the following to the Dockerfile:

RUN R -e 'install.packages(c("shinythemes"))'

This allowed the application to start, but the log also reported an error about the 'logging' package, so I also added:

RUN R -e 'install.packages(c("logging"))'
yueqiw commented 4 years ago

Thanks for pointing this out! I updated the docker file with what you suggested.

I haven't been using docker for a while. What I ended up doing was to make sure the app runs locally in Rstudio, and then deploy it on shinyapps.io following the instruction here: https://shiny.rstudio.com/articles/shinyapps.html