Incomplete requirements.txt

yueyu1030 / SumGNN

[Bioinformatics 2021] This is the repo for the paper `SumGNN: Multi-typed Drug Interaction Prediction via Efficient Knowledge Graph Summarization'.

https://academic.oup.com/bioinformatics/advance-article/doi/10.1093/bioinformatics/btab207/6189090

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Incomplete requirements.txt #6

Open sophiakrix opened 2 years ago

sophiakrix commented 2 years ago

Your requirements.txt is incomplete. When I tried to install the requirements and run the train.py, several errors were thrown. The packages I had to install manually were the following:

torch (since 1.2.0 is not up to date anymore)
scipy
dglteam dgl (since the installation of dgl works differently now)
requests
tqdm
sklearn

Please consider adding them (with the appropriate versions) to the requirements.txt to help other future users and prevent further trouble installing the package.

yueyu1030 commented 2 years ago

Thanks for the suggestion! We have updated these packages.