yyoshiaki / VIRTUS

A bioinformatics pipeline for viral transcriptome detection and quantification considering splicing.

https://github.com/yyoshiaki/VIRTUS/wiki

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createindex.job.yaml url_virus should be corrected #12

Closed zhangzlab closed 3 years ago

zhangzlab commented 3 years ago

I noticed the address for the virus sequence has been changed to viruses.fasta, which is not correct in createindex.job.yaml url_virus config. Can you change the yaml config?

Aiuthss commented 3 years ago

15

Thank you for your important suggestion. The source of virus fasta file was changed from data/viruses_763.fasta to data/viruses.fasta.

patrick-douglas commented 1 year ago

Hi How can I use a custom virus database which is located locally on my computer?

Best Patrick