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yyoshiaki / VIRTUS

A bioinformatics pipeline for viral transcriptome detection and quantification considering splicing.
https://github.com/yyoshiaki/VIRTUS/wiki
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wrapper #4

Closed Aiuthss closed 3 years ago

Aiuthss commented 4 years ago

add wrapper and sample

yyoshiaki commented 4 years ago

Fdrもsummary につけれますか？ https://www.statsmodels.org/dev/generated/statsmodels.stats.multitest.multipletests.html

yyoshiaki commented 3 years ago 
Traceback (most recent call last):                                                                       
  File "VIRTUS_wrapper.py", line 140, in <module>                                                        
    df.iloc[:,i] = x                                                                                     
  File "/home/yyasumizu/anaconda3/lib/python3.6/site-packages/pandas/core/indexing.py", line 204, in __se
titem__                                                                                                  
    indexer = self._get_setitem_indexer(key)                                                             
  File "/home/yyasumizu/anaconda3/lib/python3.6/site-packages/pandas/core/indexing.py", line 182, in _get
_setitem_indexer                                                                                         
    return self._convert_tuple(key, is_setter=True)                                                      
  File "/home/yyasumizu/anaconda3/lib/python3.6/site-packages/pandas/core/indexing.py", line 262, in _con
vert_tuple                                                                                               
    idx = self._convert_to_indexer(k, axis=i, is_setter=is_setter)                                       
  File "/home/yyasumizu/anaconda3/lib/python3.6/site-packages/pandas/core/indexing.py", line 2175, in _co
nvert_to_indexer                                                                                         
    self._validate_key(obj, axis)                                                                        
  File "/home/yyasumizu/anaconda3/lib/python3.6/site-packages/pandas/core/indexing.py", line 2014, in _va
lidate_key                                                                                               
    self._validate_integer(key, axis)                                                                    
  File "/home/yyasumizu/anaconda3/lib/python3.6/site-packages/pandas/core/indexing.py", line 2088, in _va
lidate_integer                                                                                           
    raise IndexError("single positional indexer is out-of-bounds")                                       
IndexError: single positional indexer is out-of-bounds

error occurred in line 140 iloc function. I'm using pandas==0.25.1 .