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z0on / AFS-analysis-with-moments

Standalone python scripts to do pairwise AFS analysis for population differentiation using Moments (http://www.genetics.org/content/early/2017/05/08/genetics.117.200493)
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fold*.py scripts have p_misid #1

Closed jamesfifer closed 5 years ago

jamesfifer commented 5 years ago

Hi Misha,

A bunch of the fold*.py scripts still have the percent of ancestral state mis-identification parameter (p_misid). This results in an error when running the scripts because there is no value defined for p_misid in the params=array([ ... line

z0on commented 5 years ago

thanks! I’ll fix that asap

On Aug 28, 2019, at 10:06 AM, jamesfifer notifications@github.com wrote:

Hi Misha,

A bunch of the fold*.py scripts still have the percent of ancestral state mis-identification parameter (p_misid). This results in an error when running the scripts because there is no value defined for p_misid in the params=array([ ... line

— You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHub https://github.com/z0on/AFS-analysis-with-moments/issues/1?email_source=notifications&email_token=ABZUHGAAIVB4ZSJS2E2DEB3QG2IAVA5CNFSM4IRJWC42YY3PNVWWK3TUL52HS4DFUVEXG43VMWVGG33NNVSW45C7NFSM4HH6QKCQ, or mute the thread https://github.com/notifications/unsubscribe-auth/ABZUHGCND5F3GWBPR2ATA3TQG2IAVANCNFSM4IRJWC4Q.

z0on commented 5 years ago

fixed

On Aug 28, 2019, at 10:06 AM, jamesfifer notifications@github.com wrote:

Hi Misha,

A bunch of the fold*.py scripts still have the percent of ancestral state mis-identification parameter (p_misid). This results in an error when running the scripts because there is no value defined for p_misid in the params=array([ ... line

— You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHub https://github.com/z0on/AFS-analysis-with-moments/issues/1?email_source=notifications&email_token=ABZUHGAAIVB4ZSJS2E2DEB3QG2IAVA5CNFSM4IRJWC42YY3PNVWWK3TUL52HS4DFUVEXG43VMWVGG33NNVSW45C7NFSM4HH6QKCQ, or mute the thread https://github.com/notifications/unsubscribe-auth/ABZUHGCND5F3GWBPR2ATA3TQG2IAVANCNFSM4IRJWC4Q.