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zakandrewking / escher

Build, share, and embed visualizations of metabolic pathways.
https://escher.github.io
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visualize an SMBL model? #358

Open parsanayyara opened 3 years ago

parsanayyara commented 3 years ago

Hi, it's my first time using escher - is it possible to load a model in SBML (.xml) format or should I convert it to JSON first?

Thanks in advance for any help!

EidrianGM commented 2 years ago

I think you have to use JSON format, here you will find how to read a .xml model then save it to .json to upload it to Escher

https://cobrapy.readthedocs.io/en/latest/io.html