Open aaron-mcdaid-zalando opened 6 years ago
6 failed, 110 passed in 72.82 seconds
Here is one of those six failed tests:
______________________________________________________________________________ BayesFactorTestCases.test_bayes_factor_with_nan_input _______________________________________________________________________________ self = <tests.tests_core.test_early_stopping.BayesFactorTestCases testMethod=test_bayes_factor_with_nan_input> def test_bayes_factor_with_nan_input(self): """ Check the Bayes factor function with input that contains nan values.""" > res = es.bayes_factor(self.rand_s5, self.rand_s6, num_iters=2000) tests/tests_core/test_early_stopping.py:132: _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ expan/core/early_stopping.py:273: in bayes_factor inference=inference) expan/core/early_stopping.py:223: in _bayes_sampling control={'stepsize': 0.01, 'adapt_delta': 0.99}) .tox/py36/lib/python3.6/site-packages/pystan/model.py:671: in sampling fit = self.fit_class(data) _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ _ > ??? E TypeError: __init__() takes exactly 2 positional arguments (1 given) stanfit4anon_model_d87af3570eba8e4d47ba3c301c4f7a1d_6351398166046700535.pyx:463: TypeError ----------------------------------------------------------------------------------------------- Captured stderr call ----------------------------------------------------------------------------------------------- INFO:expan.core.early_stopping:Started running bayes factor with 1000 procedure, treatment group of size 1000, control group of size normal, sampling distribution. INFO:expan.core.early_stopping:Started running bayesian inference with sampling procedure, treatment group of size 1000, control group of size 1000, normal distribution. INFO:expan.core.early_stopping:Started loading and compiling Stan model for normal distribution
@aaron-mcdaid-zalando works for me.
It could be tox cached an old version of pystan for you. Try delete .tox directory and run again. :)
6 failed, 110 passed in 72.82 seconds
Here is one of those six failed tests: