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zarr-developers / numcodecs

A Python package providing buffer compression and transformation codecs for use in data storage and communication applications.
http://numcodecs.readthedocs.io
MIT License
121 stars 82 forks source link

0.12.1: numcodecs/tests is part of the installable resources #509

Open kloczek opened 4 months ago

kloczek commented 4 months ago

Looks like test suite files are added to list of files which are installed.

```console + /usr/bin/python3 -sBm build -w --no-isolation * Getting build dependencies for wheel... [numcodecs] setting up Blosc extension [numcodecs] setting up Zstandard extension [numcodecs] setting up LZ4 extension [numcodecs] setting up compat extension [numcodecs] setting up shuffle extension [numcodecs] setting up vlen extension [numcodecs] setting up fletcher32 extension [numcodecs] setting up jenkins extension running egg_info creating numcodecs.egg-info writing numcodecs.egg-info/PKG-INFO writing dependency_links to numcodecs.egg-info/dependency_links.txt writing requirements to numcodecs.egg-info/requires.txt writing top-level names to numcodecs.egg-info/top_level.txt writing manifest file 'numcodecs.egg-info/SOURCES.txt' reading manifest file 'numcodecs.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.txt' writing manifest file 'numcodecs.egg-info/SOURCES.txt' * Building wheel... [numcodecs] setting up Blosc extension [numcodecs] setting up Zstandard extension [numcodecs] setting up LZ4 extension [numcodecs] setting up compat extension [numcodecs] setting up shuffle extension [numcodecs] setting up vlen extension [numcodecs] setting up fletcher32 extension [numcodecs] setting up jenkins extension running bdist_wheel running build running build_py creating build creating build/lib.linux-x86_64-cpython-38 creating build/lib.linux-x86_64-cpython-38/numcodecs copying ./numcodecs/__init__.py -> build/lib.linux-x86_64-cpython-38/numcodecs copying ./numcodecs/abc.py -> build/lib.linux-x86_64-cpython-38/numcodecs copying ./numcodecs/astype.py -> build/lib.linux-x86_64-cpython-38/numcodecs copying ./numcodecs/base64.py -> build/lib.linux-x86_64-cpython-38/numcodecs copying ./numcodecs/bitround.py -> build/lib.linux-x86_64-cpython-38/numcodecs copying ./numcodecs/bz2.py -> build/lib.linux-x86_64-cpython-38/numcodecs copying ./numcodecs/categorize.py -> build/lib.linux-x86_64-cpython-38/numcodecs copying ./numcodecs/checksum32.py -> build/lib.linux-x86_64-cpython-38/numcodecs copying ./numcodecs/compat.py -> build/lib.linux-x86_64-cpython-38/numcodecs copying ./numcodecs/delta.py -> build/lib.linux-x86_64-cpython-38/numcodecs copying ./numcodecs/fixedscaleoffset.py -> build/lib.linux-x86_64-cpython-38/numcodecs copying ./numcodecs/gzip.py -> build/lib.linux-x86_64-cpython-38/numcodecs copying ./numcodecs/json.py -> build/lib.linux-x86_64-cpython-38/numcodecs copying ./numcodecs/lzma.py -> build/lib.linux-x86_64-cpython-38/numcodecs copying ./numcodecs/msgpacks.py -> build/lib.linux-x86_64-cpython-38/numcodecs copying ./numcodecs/ndarray_like.py -> build/lib.linux-x86_64-cpython-38/numcodecs copying ./numcodecs/packbits.py -> build/lib.linux-x86_64-cpython-38/numcodecs copying ./numcodecs/pickles.py -> build/lib.linux-x86_64-cpython-38/numcodecs copying ./numcodecs/quantize.py -> build/lib.linux-x86_64-cpython-38/numcodecs copying ./numcodecs/registry.py -> build/lib.linux-x86_64-cpython-38/numcodecs copying ./numcodecs/shuffle.py -> build/lib.linux-x86_64-cpython-38/numcodecs copying ./numcodecs/zfpy.py -> build/lib.linux-x86_64-cpython-38/numcodecs copying ./numcodecs/zlib.py -> build/lib.linux-x86_64-cpython-38/numcodecs copying ./numcodecs/version.py -> build/lib.linux-x86_64-cpython-38/numcodecs creating build/lib.linux-x86_64-cpython-38/numcodecs/tests <<<<< FROM HERE copying ./numcodecs/tests/__init__.py -> build/lib.linux-x86_64-cpython-38/numcodecs/tests copying ./numcodecs/tests/common.py -> build/lib.linux-x86_64-cpython-38/numcodecs/tests copying ./numcodecs/tests/test_astype.py -> build/lib.linux-x86_64-cpython-38/numcodecs/tests copying ./numcodecs/tests/test_base64.py -> build/lib.linux-x86_64-cpython-38/numcodecs/tests copying ./numcodecs/tests/test_bitround.py -> build/lib.linux-x86_64-cpython-38/numcodecs/tests copying ./numcodecs/tests/test_bz2.py -> build/lib.linux-x86_64-cpython-38/numcodecs/tests copying ./numcodecs/tests/test_categorize.py -> build/lib.linux-x86_64-cpython-38/numcodecs/tests copying ./numcodecs/tests/test_checksum32.py -> build/lib.linux-x86_64-cpython-38/numcodecs/tests copying ./numcodecs/tests/test_compat.py -> build/lib.linux-x86_64-cpython-38/numcodecs/tests copying ./numcodecs/tests/test_delta.py -> build/lib.linux-x86_64-cpython-38/numcodecs/tests copying ./numcodecs/tests/test_entrypoints.py -> build/lib.linux-x86_64-cpython-38/numcodecs/tests copying ./numcodecs/tests/test_entrypoints_backport.py -> build/lib.linux-x86_64-cpython-38/numcodecs/tests copying ./numcodecs/tests/test_fixedscaleoffset.py -> build/lib.linux-x86_64-cpython-38/numcodecs/tests copying ./numcodecs/tests/test_fletcher32.py -> build/lib.linux-x86_64-cpython-38/numcodecs/tests copying ./numcodecs/tests/test_gzip.py -> build/lib.linux-x86_64-cpython-38/numcodecs/tests copying ./numcodecs/tests/test_jenkins.py -> build/lib.linux-x86_64-cpython-38/numcodecs/tests copying ./numcodecs/tests/test_json.py -> build/lib.linux-x86_64-cpython-38/numcodecs/tests copying ./numcodecs/tests/test_lz4.py -> build/lib.linux-x86_64-cpython-38/numcodecs/tests copying ./numcodecs/tests/test_lzma.py -> build/lib.linux-x86_64-cpython-38/numcodecs/tests copying ./numcodecs/tests/test_msgpacks.py -> build/lib.linux-x86_64-cpython-38/numcodecs/tests copying ./numcodecs/tests/test_ndarray_like.py -> build/lib.linux-x86_64-cpython-38/numcodecs/tests copying ./numcodecs/tests/test_packbits.py -> build/lib.linux-x86_64-cpython-38/numcodecs/tests copying ./numcodecs/tests/test_pickles.py -> build/lib.linux-x86_64-cpython-38/numcodecs/tests copying ./numcodecs/tests/test_quantize.py -> build/lib.linux-x86_64-cpython-38/numcodecs/tests copying ./numcodecs/tests/test_registry.py -> build/lib.linux-x86_64-cpython-38/numcodecs/tests copying ./numcodecs/tests/test_shuffle.py -> build/lib.linux-x86_64-cpython-38/numcodecs/tests copying ./numcodecs/tests/test_vlen_array.py -> build/lib.linux-x86_64-cpython-38/numcodecs/tests copying ./numcodecs/tests/test_vlen_bytes.py -> build/lib.linux-x86_64-cpython-38/numcodecs/tests copying ./numcodecs/tests/test_vlen_utf8.py -> build/lib.linux-x86_64-cpython-38/numcodecs/tests copying ./numcodecs/tests/test_zfpy.py -> build/lib.linux-x86_64-cpython-38/numcodecs/tests copying ./numcodecs/tests/test_zlib.py -> build/lib.linux-x86_64-cpython-38/numcodecs/tests copying ./numcodecs/tests/test_zstd.py -> build/lib.linux-x86_64-cpython-38/numcodecs/tests copying ./numcodecs/tests/test_blosc.py -> build/lib.linux-x86_64-cpython-38/numcodecs/tests <<<<< TO HERE running egg_info ```

Easiest way to sort out out would be move numcodecs/tests/ to tests/

dstansby commented 1 month ago

Is there a good reason to not include them in the installation? For re-packaging on conda-forge it is much easier to test if the tests are part of the package: https://conda-forge.org/docs/maintainer/adding_pkgs/#tests-outside-of-the-package