zavolanlab / bindz-rbp

RBP module for bindz, a bioinformatics tool to detect regulators' binding sites on RNA sequences.
https://github.com/zavolanlab/bindz-rbp
Apache License 2.0
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Rule error while plotting seq.logos #32

Closed AngryMaciek closed 4 years ago

AngryMaciek commented 4 years ago

Describe the bug Rule plot_sequence_logos raises error while trying to process one of the PWM matrices we did not check during integration tests - the file name is: PTBP1_M227_0.6. I believe there is some error with processing the . I guess we should diversify the input files for our test better...

To Reproduce Run the pipeline on all ATtRACT motifs (they are all downloaded in the CI as well). Notice that some of the PWMs do have dot in the file name.