zavolanlab / htsinfer

Infer metadata for your downstream analysis straight from your RNA-seq data
Apache License 2.0
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perf: remove duplicate adapter fragments #122

Closed balajtimate closed 1 year ago

balajtimate commented 1 year ago

Description

Removed the remaining adapters (GATCGGAAGAGCACA, TCGTATGCCGTCTTC, CCGACAGGTTCAGAG and ACAGGTTCAGAGTTC) from data/adapter_fragments.txt to increase frequency ratio between first and second most common adapters.

Fixes #121

Type of change

Checklist

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codecov[bot] commented 1 year ago

Codecov Report

Patch and project coverage have no change.

Comparison is base (ba83740) 99.78% compared to head (7c8fe62) 99.78%.

Additional details and impacted files ```diff @@ Coverage Diff @@ ## dev #122 +/- ## ======================================= Coverage 99.78% 99.78% ======================================= Files 12 12 Lines 948 948 ======================================= Hits 946 946 Misses 2 2 ``` Help us with your feedback. Take ten seconds to tell us [how you rate us](https://about.codecov.io/nps?utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=zavolanlab). Have a feature suggestion? [Share it here.](https://app.codecov.io/gh/feedback/?utm_medium=referral&utm_source=github&utm_content=comment&utm_campaign=pr+comments&utm_term=zavolanlab)

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