Publish HTSinfer on Bioconda

zavolanlab / htsinfer

Infer metadata for your downstream analysis straight from your RNA-seq data

Apache License 2.0

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Publish HTSinfer on Bioconda #145

Closed uniqueg closed 5 months ago

uniqueg commented 9 months ago

Being available on HTSinfer would make the tool easier to consume/install by users. Moreover, ZARP-cli currently cannot run the ZARP HTSinfer pipeline in Conda mode, because HTSinfer isn't available on Conda.

balajtimate commented 5 months ago

HTSinfer is now available on Bioconda: https://anaconda.org/bioconda/htsinfer, as well as on the biocontainers Docker hub: https://quay.io/repository/biocontainers/htsinfer. When we create a new release version, it'll be automatically updated.

We can also update ZARP-cli now to run it in Conda mode.