fix: transcript sampler outputs non-matching representative transcripts

zavolanlab / scRNAsim-toolz

A repository for the tools used by scRNAsim.

MIT License

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fix: transcript sampler outputs non-matching representative transcripts #14

Closed balajtimate closed 8 months ago

balajtimate commented 8 months ago

Describe the bug Currently, when reading in the annotation file, transcript-sampler outputs random representative transcript that don't belong to the gene_id.

Refactor code to allow to select the best representative transcript based on TSL and length, and match that to the expression level.