IndexError: list index out of range

zcang / COMMOT

MIT License

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IndexError: list index out of range #7

Closed QianChwnLyn closed 1 year ago

QianChwnLyn commented 1 year ago

Hi, when I want to use 'ct.pl.plot_cell_communication' to plot CCC, I got the following error: 1677674824353

Maybe you can help me solve it？

zcang commented 1 year ago

Hi, setting background to "image" is now only working with the standard Visium data with the H&E images stored in adata. Alternatively, the plotting should work with background set as the options other than "image".