Closed wasifmohdkhan closed 1 year ago
Hi @wasifmohdkhan
thank you so much for spotting this! The error originates from a dependency of the mlr3 universe, where the function for the internal hyperparameter tuning was changed. It is fixed in the development version of SIAMCAT already, so you can install it from Github and it should work (please let me know if it does work 😄). It will be updated in the Bioconductor release soon!
require("devtools")
devtools::install_github(repo = 'zellerlab/siamcat')
The version should be SIAMCAT 2.5.1
and then this error should not occur anymore
Cheers
Jakob
Hello,
Thanks for developing this package.
I encountered an error while running the command
train.model(sc_obj, method = "randomForest")
The error is
Error in tune(method = "grid_search", task = task, learner = lrn.fold, : unused argument (resolution = grid.size)
I am able to run the "lasso" model successfully but I encounter this error while running "randomforest" and "enet". I used to run this command successfully in the past. I think the error is after the Siamcat update 2.4Here is the sessionInfo: