Open jakob-wirbel opened 3 years ago
When running
stag check_input -i fasta_file -x taxonomy_file -a hmm_file -i 1
it still prints in the standard out all the warnings (>10k lines) about genes having the same sequence but different taxonomy.
With
stag check_input -i fasta_file -x taxonomy_file -a hmm_file -i 1 -w warning_file
it works and a single line with warnings is displayed in the output.
When running
it still prints in the standard out all the warnings (>10k lines) about genes having the same sequence but different taxonomy.
With
it works and a single line with warnings is displayed in the output.