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zengxiaofei / HapHiC

HapHiC: a fast, reference-independent, allele-aware scaffolding tool based on Hi-C data
https://www.nature.com/articles/s41477-024-01755-3
BSD 3-Clause "New" or "Revised" License
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Does the haphic suitable for the Dovetail OmniC extraction? #71

Closed Jimingliu60 closed 1 month ago

Jimingliu60 commented 1 month ago

Hi. Thanks for introducing such a wonderful hic assembly tool. However, there are some users are using the OmniC extraction kit, which use the Dnase as the restriction enzyme. Is the haphic suitable for the OmniC? And how should we run it?

Thanks.

zengxiaofei commented 1 month ago

I have previously answered a similar question on GitHub, you can view my response at: https://github.com/zengxiaofei/HapHiC/issues/10