zh-zhang1984 / ZhejiangProvinceICU

Code to process raw data from EHR
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Dear Zhang, I noticed that this data set is no longer available at physionet.org. Could I use this data set to complete the research I have started? #1

Open jaser1314 opened 1 year ago

Data-Designer commented 2 weeks ago

I have the same problem

jaser1314 commented 2 weeks ago

这是来自QQ邮箱的假期自动回复邮件。Thank you for your email

zh-zhang1984 commented 2 weeks ago

It is moved to another repository:

OMIX (cncb.ac.cn)https://ngdc.cncb.ac.cn/omix/release/OMIX005817


From: Zhao Chuang @.> Sent: Tuesday, September 3, 2024 10:51 AM To: zh-zhang1984/ZhejiangProvinceICU @.> Cc: Subscribed @.***> Subject: Re: [zh-zhang1984/ZhejiangProvinceICU] Dear Zhang, I noticed that this data set is no longer available at physionet.org. Could I use this data set to complete the research I have started? (Issue #1)

I have the same problem

— Reply to this email directly, view it on GitHubhttps://github.com/zh-zhang1984/ZhejiangProvinceICU/issues/1#issuecomment-2326216883, or unsubscribehttps://github.com/notifications/unsubscribe-auth/AFLCMAGZGR2MKC35U7V2VYTZUWID7AVCNFSM6AAAAABNR3PQLCVHI2DSMVQWIX3LMV43OSLTON2WKQ3PNVWWK3TUHMZDGMRWGIYTMOBYGM. You are receiving this because you are subscribed to this thread.Message ID: @.***>

Data-Designer commented 2 weeks ago

Many thanks!

赵闯

@.*** |

---- Replied Message ---- | From | Zhongheng @.> | | Date | 09/3/2024 20:07 | | To | @.> | | Cc | Zhao @.> , @.> | | Subject | Re: [zh-zhang1984/ZhejiangProvinceICU] Dear Zhang, I noticed that this data set is no longer available at physionet.org. Could I use this data set to complete the research I have started? (Issue #1) |

It is moved to another repository:

OMIX (cncb.ac.cn)https://ngdc.cncb.ac.cn/omix/release/OMIX005817


From: Zhao Chuang @.> Sent: Tuesday, September 3, 2024 10:51 AM To: zh-zhang1984/ZhejiangProvinceICU @.> Cc: Subscribed @.***> Subject: Re: [zh-zhang1984/ZhejiangProvinceICU] Dear Zhang, I noticed that this data set is no longer available at physionet.org. Could I use this data set to complete the research I have started? (Issue #1)

I have the same problem

— Reply to this email directly, view it on GitHubhttps://github.com/zh-zhang1984/ZhejiangProvinceICU/issues/1#issuecomment-2326216883, or unsubscribehttps://github.com/notifications/unsubscribe-auth/AFLCMAGZGR2MKC35U7V2VYTZUWID7AVCNFSM6AAAAABNR3PQLCVHI2DSMVQWIX3LMV43OSLTON2WKQ3PNVWWK3TUHMZDGMRWGIYTMOBYGM. You are receiving this because you are subscribed to this thread.Message ID: @.***>

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Data-Designer commented 2 weeks ago

Dear Zhang,

I have downloaded your dataset, but the diagnosis_datetime field is difficult to utilize. The majority of values are NA, and they do not adhere to a standard timestamp format. How can I construct a longitudinal EHR based on your dataset? Could your provide more insights? Many thanks.

"","patient_SN","Hospital_ID","ICD10_code","ICD10_name","Diagnosis_DateTime","DiagnosisName" "1","5a86d2dcc480a4ac55615389aaa9017e","7610433","S02.101","颅底骨折",NA,"Skull base fracture" "2","5a86d2dcc480a4ac55615389aaa9017e","7610433","S09.902","面部损伤",NA,"Facial injury" "3","5a86d2dcc480a4ac55615389aaa9017e","7610433","S02.201;S02.402;S02.403;S02.601","鼻骨骨折;颧骨骨折;上颌骨骨折;下颌骨骨折",NA,"Fracture of nasal bone; Zygomatic fracture; Maxillary fracture; Mandibular fracture" "4","5a86d2dcc480a4ac55615389aaa9017e","7610433","S02.101;R57.101","颅底骨折;出血性休克",NA,"Skull base fracture; Hemorrhagic shock" "5","5a86d2dcc480a4ac55615389aaa9017e","7610433","S09.902;S02.201;S02.402;S02.403;S02.601;S02.101","面部损伤;鼻骨骨折;颧骨骨折;上颌骨骨折;下颌骨骨折;颅底骨折",0,"Facial injuries; Fracture of nasal bone; Zygomatic fracture; Maxillary fracture; Mandibular fracture; Skull base fracture" "6","5a86d2dcc480a4ac55615389aaa9017e","7610433","S09.902;S02.201;S02.402;S02.403;S02.601;S02.101","面部损伤;鼻骨骨折;颧骨骨折;上颌骨骨折;下颌骨骨折;颅底骨折",6.78034722222222,"Facial injuries; Fracture of nasal bone; Zygomatic fracture; Maxillary fracture; Mandibular fracture; Skull base fracture"

zh-zhang1984 commented 2 weeks ago

The time for diagnosis is not accurate because all diagnosis can be entered during anytime of the hospital stay; just ignore it. The timestamp is shifted in reference with the admission time.

Data-Designer commented 2 weeks ago

Dear Prof. Zhang,

I am a PhD student at HKUST currently engaged in research related to AI for Healthcare. I happened to come across your substantial contributions in this field. In the future, I would be interested in exploring potential collaborations with you. If possible, would you be open to connecting on WeChat for further discussions?

Warm regards, Chuang Zhao

zh-zhang1984 commented 2 weeks ago

my wechat: 18258830786 发自我的 iPhone

在 2024年9月4日,16:54,Zhao Chuang @.***> 写道:



Dear Prof. Zhang,

I am a PhD student at HKUST currently engaged in research related to AI for Healthcare. I happened to come across your substantial contributions in this field. In the future, I would be interested in exploring potential collaborations with you. If possible, would you be open to connecting on WeChat for further discussions?

Warm regards, Chuang Zhao

— Reply to this email directly, view it on GitHubhttps://github.com/zh-zhang1984/ZhejiangProvinceICU/issues/1#issuecomment-2328291113, or unsubscribehttps://github.com/notifications/unsubscribe-auth/AFLCMAECCRRWIQBA63MWZ3DZU3DFVAVCNFSM6AAAAABNR3PQLCVHI2DSMVQWIX3LMV43OSLTON2WKQ3PNVWWK3TUHMZDGMRYGI4TCMJRGM. You are receiving this because you commented.Message ID: @.***>