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zhanghao-njmu / SCP

An end-to-end Single-Cell Pipeline designed to facilitate comprehensive analysis and exploration of single-cell data.
https://zhanghao-njmu.github.io/SCP/
GNU General Public License v3.0
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Error: RunDEtest #187

Open WANGROUOYI opened 10 months ago

WANGROUOYI commented 10 months ago

pancreas_sub <- RunDEtest(srt = pancreas_sub, group_by = "CellType", fc.threshold = 1, only.pos = FALSE) [2023-10-23 23:22:04.91164] Start DEtest Workers: 10 Find all markers(wilcox) among 5 groups... | | 0%Error in serialize(data, node$con) : 链结书写发生了错误 Error in serialize(data, node$con) : 链结书写发生了错误

how can I solve this problem?

zhanghao-njmu commented 9 months ago

This is an issue with BiocParallel. Please try restarting a new R session before running RunDEtest.