scData <- RunMonocle3(srt = scData,clusters = "cell_fate", graph = "scVI_SNN")
Whether to use partitions to learn disjoint graph in each partition?
1: TRUE
2: FALSE
Selection: 2
|=======================================================| 100%
Error in scale$guide == "none" :
comparison (==) is possible only for atomic and list types
In addition: Warning messages:
1: No shared levels found between names(values) of the manual
scale and the data's fill values.
2: No shared levels found between names(values) of the manual
scale and the data's fill values.
scData <- RunMonocle3(srt = scData,clusters = "cell_fate", graph = "scVI_SNN") Whether to use partitions to learn disjoint graph in each partition?
1: TRUE 2: FALSE
Selection: 2 |=======================================================| 100% Error in scale$guide == "none" : comparison (==) is possible only for atomic and list types In addition: Warning messages: 1: No shared levels found between
names(values)of the manual scale and the data's fill values. 2: No shared levels found betweennames(values)of the manual scale and the data's fill values.