Changes SBMLReader to ignore boundary species by default. This fixes a bug where the psamm-sbml-model command would include the boundary species in the model when running commands. This also makes it easier to use SBMLReader for the typical tasks of loading SBML files and creating models using create_model().
Changes
SBMLReader
to ignore boundary species by default. This fixes a bug where thepsamm-sbml-model
command would include the boundary species in the model when running commands. This also makes it easier to useSBMLReader
for the typical tasks of loading SBML files and creating models usingcreate_model()
.