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zhangrengang / TEsorter

TEsorter: an accurate and fast method to classify LTR-retrotransposons in plant genomes
https://doi.org/10.1093/hr/uhac017
GNU General Public License v3.0
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TEsorter genome.fasta -genome -p 20 -prob 0.9 #50

Open JianjiaDTU opened 1 year ago

JianjiaDTU commented 1 year ago

Could I just use this model for type classification? Because I see that a lot of work should first identify repeat et al.

zhangrengang commented 1 year ago

I do not understand your purpose. This GENOME mode just idenitfy TE proteins across the whole genome. Another ELEMENT mode aims to classify TE elements.