I use kallisto output files and trim some features but still, many genes remain. For instance, my input count matrix is 91,897 x 32. ComBat-Seq runs for 2+ days. It seems it is busy at match_quantiles() and is there any plan to make faster/parallelization?
I use kallisto output files and trim some features but still, many genes remain. For instance, my input count matrix is 91,897 x 32. ComBat-Seq runs for 2+ days. It seems it is busy at match_quantiles() and is there any plan to make faster/parallelization?