Some permutated p-values >1

zhanxw / rvtests

Rare variant test software for next generation sequencing data

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Some permutated p-values >1 #142

Open UrsaGitHub opened 1 year ago

UrsaGitHub commented 1 year ago

Hello,

I run rvtests and everything worked fine. But when I looked at the result file for SKAT analysis I got some PermPvalues for some genes over 1 (up to 625). Can you please suggest what could cause this issue?

Many thanks for your help!