zhanxw / rvtests

Rare variant test software for next generation sequencing data
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--setFile how are overlapping regions handled? #152

Open samreenzafer opened 2 months ago

samreenzafer commented 2 months ago

Hi I just wanted to ask that if I provide overlapping regions in a set , are the variants falling in two regions considered just once (as it should be) or twice ? Example, set1 1:100-200,1:180-300 The two regions in set1 have a 20 bp overlap.

Thank You.