Open zx8754 opened 5 years ago
This looks like a good feature. But my concern is that some test outputs two p-values, one for analytic p-value, the other for permutation p-value. Maybe I should report if any of the p-values is no larger than the threshold. @dajiangliu
Similar to plink:
--pfilter [threshold]
.https://www.cog-genomics.org/plink/1.9/assoc