zhengxwen / HIBAG

R package – HLA Genotype Imputation with Attribute Bagging (development version only)
https://hibag.s3.amazonaws.com/index.html
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hlaConvSequence function: No matching: 02:02 #31

Open arsangjang opened 1 month ago

arsangjang commented 1 month ago

Dear Xiuwen,

Thank you so much for developing the wonderful HIBAG package.

I am currently using HIBAG to analyze the association between HLA and an outcome. However, I encountered an issue with the hlaConvSequence function, specifically an error indicating "No matching for HLA_DQB1*02:02." This results in missing sequences for the relevant samples, which leads to a reduction in my sample size.

Is there a way to resolve this issue to prevent the reduction in sample size? Any guidance or suggestions you can provide would be greatly appreciated.