Should seqSetFilter() use the same data type as input for `sample.id` and `variant.id`??

zhengxwen / SeqArray

Data management of large-scale whole-genome sequence variant calls (Development version only)

http://www.bioconductor.org/packages/SeqArray

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Closed zhengxw-ab closed 4 years ago

zhengxw-ab commented 4 years ago

library(SeqArray)

f <- seqOpen(seqExampleFileName())
is(seqGetData(f, "sample.id"))
# "character"  "vector"
seqSetFilter(f, sample.id=c(10,101,22))

Error in .local(object, variant.sel, ...) :
  Unable to convert string to double.