Closed zhengxwen closed 4 years ago
library(SeqArray) # open the GDS file f <- seqOpen(seqExampleFileName("gds")) seqSetFilter(f, variant.sel=c(1:50, 1:50))
Fails to select the top 50 variants:
# of selected variants: 100
Incorrect read of selected variants
seqGetData(f, "chromosome")
[1] "1" "1" "1" "1" "1" "1" "1" "1" "1" "1" "1" "1" "1" "1" "1" "1" "1" "1" [19] "1" "1" "1" "1" "1" "1" "1" "1" "1" "1" "1" "1" "1" "1" "1" "1" "1" "1" [37] "1" "1" "1" "1" "1" "1" "1" "1" "1" "1" "1" "1" "1" "1" "" "" "" "" [55] "" "" "" "" "" "" "" "" "" "" "" "" "" "" "" "" "" "" [73] "" "" "" "" "" "" "" "" "" "" "" "" "" "" "" "" "" "" [91] "" "" "" "" "" "" "" "" "" ""
Fails to select the top 50 variants:
Incorrect read of selected variants