the version on Github didn't build cleanly, but it turns out this was simply due to the lack of a bin/ subdirectory. So I added one. I started poking around in the makefile to make everything else build, too, but decided to go with the simplest thing that could possibly work...
the version on Github didn't build cleanly, but it turns out this was simply due to the lack of a bin/ subdirectory. So I added one. I started poking around in the makefile to make everything else build, too, but decided to go with the simplest thing that could possibly work...
Will be interesting to compare against pileOmeth (https://github.com/RamsinghLab/PileOMeth or the upstream https://github.com/dpryan79/PileOMeth ) since you are calling SNPs "in flight".