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zhou-lab / biscuit

BISulfite-seq CUI Toolkit
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How to prepare for setup_file and files in setup_file? #30

Open xflicsu opened 5 years ago

xflicsu commented 5 years ago

In the QC part, you provide a script "QC.sh" to output QC of BS-seq data. But you did not describe the format of setup_file and its containing files. Could you provide an example of those files with hg38 version?

okartal commented 5 years ago

There are links to mm10 ad hg38 examples on the main page of the repository, you can download them. However, I agree that the contents ("QC assets") are not well documented.