I am looking for snp-calling tools to test how many SNPs could be called in our dataset. And I've already tried Bis-snp and Bs-snper, which are used for WGBS snp-calling.
Biscuit looks to be a cool tool. But from the limited documentation, my understanding is like Biscuit is for methylation call only, not snp call. Is that correct?
Thank you very much for your attention. @zwdzwd @ttriche @zackramjan
Best regards,
Andy Wang
Research Assistant
UBC Heart Lung Innovation | Daley Lab
Room 166, 1081 Burrard Street | St. Paul's Hospital
Vancouver, B.C. Canada, V6Z 1Y6
Hi,
I am looking for snp-calling tools to test how many SNPs could be called in our dataset. And I've already tried Bis-snp and Bs-snper, which are used for WGBS snp-calling.
Biscuit looks to be a cool tool. But from the limited documentation, my understanding is like Biscuit is for methylation call only, not snp call. Is that correct?
Thank you very much for your attention. @zwdzwd @ttriche @zackramjan
Best regards, Andy Wang
Research Assistant UBC Heart Lung Innovation | Daley Lab Room 166, 1081 Burrard Street | St. Paul's Hospital Vancouver, B.C. Canada, V6Z 1Y6